RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 BTN2A1Q7KYR7 527 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 MRPL21Q7Z2W9 205 aaKnown RBP12.05□□□□□ -0.48
MCF2L-220ENST00000464800 VMO1Q7Z5L0 202 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 SLCO4A1Q96BD0 722 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 FAM46AQ96IP4 442 aaKnown RBP12.05□□□□□ -0.48
MCF2L-220ENST00000464800 GPX7Q96SL4 187 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-220ENST00000464800 RASSF4Q9H2L5 321 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 NRIP3Q9NQ35 241 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 CMTM6Q9NX76 183 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 ZNRD1Q9P1U0 126 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 CAB39Q9Y376 341 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-220ENST00000464800 ZNF816-ZNF321PA0A0X1KG74 233 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 F5H5K5 113 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 DVL1O14640 695 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 OR10H3O60404 316 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 TSPAN9O75954 239 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 PTBP3O95758 552 aaKnown RBP12.04□□□□□ -0.48
MCF2L-220ENST00000464800 ZNF682O95780 498 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 GYPAP02724 150 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 LCATP04180 440 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 FBP1P09467 338 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 TGFBR2P37173 567 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 TRAP1Q12931 704 aaKnown RBP12.04□□□□□ -0.48
MCF2L-220ENST00000464800 ECH1Q13011 328 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 RSPO1Q2MKA7 263 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-220ENST00000464800 CDONQ4KMG0 1287 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 KPRPQ5T749 579 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-220ENST00000464800 CFAP77Q6ZQR2 320 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 REC114Q7Z4M0 266 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 PLPP7Q8NBV4 271 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 ST8SIA4Q92187 359 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 PITX2Q99697 317 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 ATF6BQ99941 703 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 FGFR1OP2Q9NVK5 253 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 RPUSD1Q9UJJ7 312 aaKnown RBP12.04□□□□□ -0.48
MCF2L-220ENST00000464800 AURKCQ9UQB9 309 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 SIGLEC7Q9Y286 467 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 KPTNQ9Y664 436 aa12.04□□□□□ -0.48
MCF2L-220ENST00000464800 GMDSO60547 372 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 OPN1MWP04001 364 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 OPN1MW2P0DN77 364 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 OPN1MW3P0DN78 364 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 RPS6KA3P51812 740 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 LIPEQ05469 1076 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 IFI44LQ53G44 452 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 SAMD5Q5TGI4 173 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 CGB2Q6NT52 195 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 Q6ZPA2 131 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 FKBP9P1Q75LS8 142 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 FAM90A1Q86YD7 464 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 LINC00346Q8IVM7 164 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 SLC15A3Q8IY34 581 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 GALNT4Q8N4A0 578 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 NPRL2Q8WTW4 380 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 RCN3Q96D15 328 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 TSSK2Q96PF2 358 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 SEMA6AQ9H2E6 1030 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 ANKRD19PQ9H560 264 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 CNTD2Q9H8S5 307 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 C1orf123Q9NWV4 160 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 ONECUT1Q9UBC0 465 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 AP3M1Q9Y2T2 418 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 IER3IP1Q9Y5U9 82 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 CAPN7Q9Y6W3 813 aa12.03□□□□□ -0.48
MCF2L-220ENST00000464800 IGLV1-36A0A0B4J1U3 117 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 hCG_1807616A0A1W2PRN6 198 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 ANKRD61A6NGH8 418 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 A6NLC8 198 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 CD300LBA8K4G0 201 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 DCTN6O00399 190 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 CXCR6O00574 342 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 GSTA4O15217 222 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 PTP4A3O75365 173 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 FCN3O75636 299 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 PRB2P02812 416 aaPredicted RBP12.02□□□□□ -0.49
MCF2L-220ENST00000464800 GGT2P36268 569 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 MDH1P40925 334 aaKnown RBP12.02□□□□□ -0.49
MCF2L-220ENST00000464800 CDKN2AP42771 156 aaKnown RBP12.02□□□□□ -0.49
MCF2L-220ENST00000464800 GUCA2AQ02747 115 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 FAM189A2Q15884 450 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 SLC18B1Q6NT16 456 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 METAP1DQ6UB28 335 aaPredicted RBP12.02□□□□□ -0.49
MCF2L-220ENST00000464800 DPY19L2P2Q6ZN68 376 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 Q6ZTK2 550 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 CBLL1Q75N03 491 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 ARPINQ7Z6K5 226 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 CYP4Z1Q86W10 505 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 SLC26A10Q8NG04 563 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 OR2AJ1Q8NGZ0 328 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 RSRC1Q96IZ7 334 aaKnown RBP12.02□□□□□ -0.49
MCF2L-220ENST00000464800 HSH2DQ96JZ2 352 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 KAAG1Q9UBP8 84 aa12.02□□□□□ -0.49
MCF2L-220ENST00000464800 SLC22A2O15244 555 aa12.01□□□□□ -0.49
MCF2L-220ENST00000464800 PPP1R3DO95685 299 aa12.01□□□□□ -0.49
MCF2L-220ENST00000464800 TXNDC12O95881 172 aa12.01□□□□□ -0.49
MCF2L-220ENST00000464800 SERPINA1P01009 418 aa12.01□□□□□ -0.49
MCF2L-220ENST00000464800 EEF1B2P24534 225 aaKnown RBP12.01□□□□□ -0.49
MCF2L-220ENST00000464800 GABRA5P31644 462 aa12.01□□□□□ -0.49
MCF2L-220ENST00000464800 TPTEP56180 551 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms