RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 SPSB2Q99619 263 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 SMIM3Q9BZL3 60 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 S1PR5Q9H228 398 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 METTL8Q9H825 291 aaKnown RBP11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 PDE7BQ9NP56 450 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 MED12Q93074 2177 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 LINC01553A4QN01 128 aa11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 MEGF11A6BM72 1044 aa11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 C2orf72A6NCS6 295 aa11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 TXNL1O43396 289 aa11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 IFNA4P05014 189 aa11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 CD37P11049 281 aa11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 GLRA1P23415 457 aa11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 SUPT4H1P63272 117 aaKnown RBP11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 SMCO1Q147U7 214 aa11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 EIF2S3LQ2VIR3 472 aaKnown RBP11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 RTL10Q7L3V2 364 aa11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 PNLDC1Q8NA58 520 aaKnown RBP11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 PTPMT1Q8WUK0 201 aaPredicted RBP11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 IP6K3Q96PC2 410 aa11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 NMES1Q9C002 83 aa11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 RPS10P5Q9NQ39 176 aa11.21□□□□□ -0.62
CLCNKA-204ENST00000464764 TRAV36DV7A0A075B6V5 113 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 ZNF354AO60765 605 aaPredicted RBP11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 OR8U9P0C7N5 309 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 BCKDHBP21953 392 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 QRFPP83859 136 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 NAAAQ02083 359 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 ECH1Q13011 328 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 PLAC9Q5JTB6 97 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 PHF19Q5T6S3 580 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 OOSP2Q86WS3 158 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 ZNF101Q8IZC7 436 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 OR8U1Q8NH10 309 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 TERB2Q8NHR7 220 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 ADAMTS17Q8TE56 1095 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 FGF14Q92915 247 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 TSLPQ969D9 159 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 HIST1H2BAQ96A08 127 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 SULT4A1Q9BR01 284 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 LOC390937A0A1W2PQ73 354 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 MED19A0JLT2 244 aaPredicted RBP11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 HSPB2A8KAH6 182 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 RAD51DO75771 328 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 IL33O95760 270 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 HEXAP06865 529 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 SFTPBP07988 381 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 IFI6P09912 130 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 SLC37A1P57057 533 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 RAB5BP61020 215 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 HTRA3P83110 453 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 HGFACQ04756 655 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 HSPB2Q16082 182 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 FAM76BQ5HYJ3 339 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 AWAT2Q6E213 333 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 PARM1Q6UWI2 310 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 IL34Q6ZMJ4 242 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 MAMDC2Q7Z304 686 aaPredicted RBP11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 PPP1R3BQ86XI6 285 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 OR13H1Q8NG92 308 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 THRSPQ92748 146 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 MAP3K3Q99759 626 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 TXNIPQ9H3M7 391 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 SEC61A2Q9H9S3 476 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 ZNF107Q9UII5 783 aaPredicted RBP11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 C5orf52A6NGY3 159 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 A6NLC8 198 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 MPIG6BO95866 241 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 S100A6P06703 90 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 SNRNP70P08621 437 aaKnown RBP11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 SLC2A1P11166 492 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 HOXB2P14652 356 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 PTAFRP25105 342 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 EMP2P54851 167 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 IGLV3-21P80748 117 aaPredicted RBP11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 GLO1Q04760 184 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 FABP9Q0Z7S8 132 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 TMEM128Q5BJH2 165 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 PRSS58Q8IYP2 241 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 TMEM41AQ96HV5 264 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 BCL2L14Q9BZR8 327 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 SLC5A7Q9GZV3 580 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 TAF9BQ9HBM6 251 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 MED29Q9NX70 200 aa11.2□□□□□ -0.62
CLCNKA-204ENST00000464764 A0A0A6YYH2 397 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 A0A1B0GV50 99 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 A6NJ64 397 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 FCGR3AP08637 254 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 ZNF823P16415 610 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 CX3CR1P49238 355 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 CLDN6P56747 220 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 PRTGQ2VWP7 1150 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 KRBOX4Q5JUW0 171 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 PRSS54Q6PEW0 395 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 SLC22A18ASQ8N1D0 253 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 C19orf47Q8N9M1 422 aaKnown RBP11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 SLC26A10Q8NG04 563 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms