RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 PYCR1P32322 319 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 MTNR1AP48039 350 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 PITPNBP48739 271 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 PCK2Q16822 640 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 TEX30Q5JUR7 227 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 DCDC5Q6ZRR9 648 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 ARHGAP24Q8N264 748 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 LNX2Q8N448 690 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 CYB561A3Q8NBI2 242 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 OR9Q2Q8NGE9 314 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 OR4C15Q8NGM1 316 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 MS4A7Q9GZW8 240 aaPredicted RBP12□□□□□ -0.49
SNRNP40-203ENST00000463988 MAGIXQ9H6Y5 334 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 BAIAP2Q9UQB8 552 aa12□□□□□ -0.49
SNRNP40-203ENST00000463988 IGHV3-64DA0A0J9YX35 117 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 DNAJC9-AS1A6NH13 148 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 CCNB2O95067 398 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 PLATP00750 562 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 GASTP01350 101 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 EGR1P18146 543 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 SLC25A1P53007 311 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 GNGT1P63211 74 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 MXRA7P84157 204 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 ZNF92Q03936 586 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 BAMBIQ13145 260 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 OR8G1Q15617 311 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 KCNJ8Q15842 424 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 CYP2R1Q6VVX0 501 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 BCL6BQ8N143 479 aaPredicted RBP11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 PARP8Q8N3A8 854 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 SPERTQ8NA61 448 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 SLC37A3Q8NCC5 494 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 OR8D4Q8NGM9 314 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 ZNF48Q96MX3 618 aaPredicted RBP11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 ZNF747Q9BV97 191 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 NMNAT2Q9BZQ4 307 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 MUC13Q9H3R2 512 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 OPA3Q9H6K4 179 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 FN3KRPQ9HA64 309 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 MRPL15Q9P015 296 aaKnown RBP11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 RNF7Q9UBF6 113 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 CLN8Q9UBY8 286 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 COMMD3-BMI1R4GMX3 469 aa11.99□□□□□ -0.49
SNRNP40-203ENST00000463988 TVP23AA6NH52 213 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 SPRY1O43609 319 aaPredicted RBP11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 FAM20BO75063 409 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 RNASE1P07998 156 aaKnown RBP11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 IGHV4-38-2P0DP08 117 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 ATP6V1B2P21281 511 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 CA6P23280 308 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 FMO3P31513 532 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 PSMB10P40306 273 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 ENTPD1P49961 510 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 NPY4RP50391 375 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 BLVRAP53004 296 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 PRSS12P56730 875 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 BPIFB3P59826 476 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 MPPED2Q15777 294 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 SNAI3Q3KNW1 292 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 FAM201AQ5SY85 155 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 WDR25Q64LD2 544 aaPredicted RBP11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 ZNF841Q6ZN19 808 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 DCXRQ7Z4W1 244 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 ZNRF4Q8WWF5 429 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 SLC25A28Q96A46 364 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 C1orf147Q96MC9 270 aaPredicted RBP11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 NUDT16L1Q9BRJ7 211 aaKnown RBP11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 COPS4Q9BT78 406 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 TSSK6Q9BXA6 273 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 DGCR6LQ9BY27 220 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 TRIM36Q9NQ86 728 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 TBC1D23Q9NUY8 699 aa11.98□□□□□ -0.49
SNRNP40-203ENST00000463988 TCRBV5S2A0A599 114 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 GGT3PA6NGU5 568 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 ZNF593O00488 134 aaPredicted RBP11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 NDUFA2O43678 99 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 RPS27P42677 84 aaKnown RBP11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 MZT1Q08AG7 82 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 MICAQ29983 383 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 GLYATL3Q5SZD4 288 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 PRAMEF6Q5VXH4 476 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 CD276Q5ZPR3 534 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 LCN8Q6JVE9 175 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 SHISA2Q6UWI4 295 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 FITM2Q8N6M3 262 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 AQP11Q8NBQ7 271 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 OR2T33Q8NG76 320 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 OR51L1Q8NGJ5 315 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 SLAMF6Q96DU3 332 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 KCNJ15Q99712 375 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 ADAT1Q9BUB4 502 aaKnown RBP11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 PRDM13Q9H4Q3 707 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 UFSP2Q9NUQ7 469 aa11.97□□□□□ -0.49
SNRNP40-203ENST00000463988 B2RBV5 119 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 ZNF878C9JN71 531 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 LGALS8O00214 317 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 XRCC2O43543 280 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 ENSAO43768 121 aaKnown RBP11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 IFNGP01579 166 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 SPARCP09486 303 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms