RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CGAP01215 116 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 IGF2P01344 180 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CRHP06850 196 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CTLA4P16410 223 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 AHCYP23526 432 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 FMO3P31513 532 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 PYCR1P32322 319 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 GGT2P36268 569 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CAPGP40121 348 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CD79BP40259 229 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 RPS27P42677 84 aaKnown RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CLDN17P56750 224 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CARD18P57730 90 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SMIM11AP58511 58 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ISL1P61371 349 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SIRPAP78324 504 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 PUDPQ08623 228 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ZP4Q12836 540 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 PMS2P3Q13401 168 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 KRR1Q13601 381 aaKnown RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 MAD2L1BPQ15013 274 aaPredicted RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 TSC22D1Q15714 1073 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ALG10Q5BKT4 473 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 LINC01590Q5TEZ4 76 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF691Q5VV52 312 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 PAQR6Q6TCH4 344 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CREB3L2Q70SY1 520 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 H1FNTQ75WM6 255 aaPredicted RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 FCRLAQ7L513 359 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SHFQ7M4L6 423 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 GPAT4Q86UL3 456 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 TUSC5Q8IXB3 177 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 TMEM123Q8N131 208 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 PACRGLQ8N7B6 248 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 TMEM217Q8N7C4 229 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 TCEANCQ8N8B7 351 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SYT14Q8NB59 555 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SLC37A3Q8NCC5 494 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 NPEPL1Q8NDH3 523 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 OR9K2Q8NGE7 335 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 OR52E2Q8NGJ4 325 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 OR6S1Q8NH40 331 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 FAM81AQ8TBF8 368 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CYGBQ8WWM9 190 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 PTP4A1Q93096 173 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 MUL1Q969V5 352 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 INTS12Q96CB8 462 aaKnown RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 MED30Q96HR3 178 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ERMAPQ96PL5 475 aaPredicted RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 GPX7Q96SL4 187 aaPredicted RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 NMNAT3Q96T66 252 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 IFT27Q9BW83 186 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 AMBNQ9NP70 447 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 PAK1IP1Q9NWT1 392 aaPredicted RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 TAS2R16Q9NYV7 291 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 TVP23BQ9NYZ1 205 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 DNAJC27Q9NZQ0 273 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 PRDM4Q9UKN5 801 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 TRAPPC4Q9Y296 219 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 TMEM5Q9Y2B1 443 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 IGLV1-36A0A0B4J1U3 117 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-204ENST00000463622 MAGEB4O15481 346 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-204ENST00000463622 RNF13O43567 381 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 CYTIPO60759 359 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 ENTPD6O75354 484 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 MPZL1O95297 269 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 TXNDC12O95881 172 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 MT-ATP6P00846 226 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 IGHMP01871 453 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 TFP02787 698 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 CD14P08571 375 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 HTR1AP08908 422 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 DANCRP0C864 163 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 PGA4P0DJD7 388 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 PGA3P0DJD8 388 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 SLC2A5P22732 501 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 AGTR1P30556 359 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 CDAP32320 146 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 IFNA8P32881 189 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 RPL4P36578 427 aaKnown RBP3.1□□□□□ -1.91
SCFD1-204ENST00000463622 RFX2P48378 723 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 RPS6KA3P51812 740 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 HCCSP53701 268 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 CDH15P55291 814 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 BIDP55957 195 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 SLC35A1P78382 337 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.1□□□□□ -1.91
SCFD1-204ENST00000463622 LOXL1Q08397 574 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-204ENST00000463622 CAMK2DQ13557 499 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 BCL2A1Q16548 175 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 MEP1BQ16820 701 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 TMEM249Q2WGJ8 235 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 PDLIM3Q53GG5 364 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-204ENST00000463622 BEX5Q5H9J7 111 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 TSPO2Q5TGU0 170 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 C9orf135Q5VTT2 229 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 AADACL4Q5VUY2 407 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 PLBD1Q6P4A8 553 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 UGT2A3Q6UWM9 527 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms