RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 DIRC2Q96SL1 478 aa15□□□□□ -0.01
VPS52-214ENST00000463486 CNN2Q99439 309 aaKnown RBP15□□□□□ -0.01
VPS52-214ENST00000463486 ZNF275Q9NSD4 429 aaPredicted RBP15□□□□□ -0.01
VPS52-214ENST00000463486 NAV3Q8IVL0 2385 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 H0YL77 283 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 MLNRO43193 412 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 H2BFMP0C1H6 154 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 SBK2P0C263 348 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 TMEM33P57088 247 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 ZNF121P58317 390 aaPredicted RBP14.99□□□□□ -0.01
VPS52-214ENST00000463486 CDC42P60953 191 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 MALLQ13021 153 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 RCN1Q15293 331 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 TRIP10Q15642 601 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 DEGS2Q6QHC5 323 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 ZNF283Q8N7M2 679 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 FAM81AQ8TBF8 368 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 SAP30LQ9HAJ7 183 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 FAM118AQ9NWS6 357 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 DNAJC27Q9NZQ0 273 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 H2AFY2Q9P0M6 372 aaPredicted RBP14.99□□□□□ -0.01
VPS52-214ENST00000463486 WARS2Q9UGM6 360 aaKnown RBP14.99□□□□□ -0.01
VPS52-214ENST00000463486 LAMP5Q9UJQ1 280 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 LRP12Q9Y561 859 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 ORC6Q9Y5N6 252 aa14.99□□□□□ -0.01
VPS52-214ENST00000463486 IGHV1-69-2A0A0G2JMI3 117 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 CD300LBA8K4G0 201 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 WNT9BO14905 357 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 SLC16A6O15403 523 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 CDC14BO60729 498 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 ENTPD6O75354 484 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 RBMXP38159 391 aaKnown RBP14.98□□□□□ -0.01
VPS52-214ENST00000463486 OCLNQ16625 522 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 TMEM249Q2WGJ8 235 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 ZMAT1Q5H9K5 638 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 Q71RC1 249 aaPredicted RBP14.98□□□□□ -0.01
VPS52-214ENST00000463486 PGAP1Q75T13 922 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 ZNF540Q8NDQ6 660 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 BHLHE23Q8NDY6 225 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 OR2Z1Q8NG97 314 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 ELMOD3Q96FG2 381 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 OR8B4Q96RC9 309 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 DECR2Q9NUI1 292 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 CLN6Q9NWW5 311 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 AASSQ9UDR5 926 aa14.98□□□□□ -0.01
VPS52-214ENST00000463486 C2CD3Q4AC94 2353 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 J3QRE1 110 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 PSMD9O00233 223 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 MAGEB4O15481 346 aaPredicted RBP14.97□□□□□ -0.01
VPS52-214ENST00000463486 SRSF10O75494 262 aaKnown RBP14.97□□□□□ -0.01
VPS52-214ENST00000463486 APOC1P02654 83 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 SELEP16581 610 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 HSD11B1P28845 292 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 ELF3P78545 371 aaPredicted RBP14.97□□□□□ -0.01
VPS52-214ENST00000463486 TNFAIP6P98066 277 aaPredicted RBP14.97□□□□□ -0.01
VPS52-214ENST00000463486 FAM3AP98173 230 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 TMED1Q13445 227 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 ZNF684Q5T5D7 378 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 LPCAT4Q643R3 524 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 FAM57BQ71RH2 274 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 SLC35F2Q8IXU6 374 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 ENTHD1Q8IYW4 607 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 ZNF679Q8IYX0 411 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 OR52H1Q8NGJ2 320 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 OR13G1Q8NGZ3 307 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 RHOXF1Q8NHV9 184 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 SOX7Q9BT81 388 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 NIPAL2Q9H841 368 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 DCAF16Q9NXF7 216 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 IL19Q9UHD0 177 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 N6AMT1Q9Y5N5 214 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 TMEM14AQ9Y6G1 99 aa14.97□□□□□ -0.01
VPS52-214ENST00000463486 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.97□□□□□ -0.012e-6■■■■■ 29.4
VPS52-214ENST00000463486 LOC100130705A0A1B0GUX0 176 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 CASQ2O14958 399 aaPredicted RBP14.96□□□□□ -0.01
VPS52-214ENST00000463486 ANXA2P07355 339 aaKnown RBP14.96□□□□□ -0.01
VPS52-214ENST00000463486 IGHV4-31P0DP07 118 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 IL2RGP31785 369 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 DCTDP32321 178 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 PSMA6P60900 246 aaKnown RBP14.96□□□□□ -0.01
VPS52-214ENST00000463486 KCTD18Q6PI47 426 aaPredicted RBP14.96□□□□□ -0.01
VPS52-214ENST00000463486 ZNF322Q6U7Q0 402 aaPredicted RBP14.96□□□□□ -0.01
VPS52-214ENST00000463486 SSX6Q7RTT6 188 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 MRPL21Q7Z2W9 205 aaKnown RBP14.96□□□□□ -0.01
VPS52-214ENST00000463486 KRT77Q7Z794 578 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 OR10AD1Q8NGE0 317 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 OR51G2Q8NGK0 314 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 ASB17Q8WXJ9 295 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 C1orf159Q96HA4 380 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 MNTQ99583 582 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 EGLN1Q9GZT9 426 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 TMEM100Q9NV29 134 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 FAM206AQ9NX38 181 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 IMPAD1Q9NX62 359 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 TREM2Q9NZC2 230 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 GMPPBQ9Y5P6 360 aa14.96□□□□□ -0.01
VPS52-214ENST00000463486 hCG_38984A0A1B0GV85 526 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 LRP5LA4QPB2 252 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 F5H5P2 479 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 XRCC2O43543 280 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms