RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 CENPXA8MT69 81 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 ACOT7O00154 380 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 ALDOBP05062 364 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 CCL1P22362 96 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 OTX1P32242 354 aaPredicted RBP11.24□□□□□ -0.61
VAPB-203ENST00000463370 PRSS12P56730 875 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 SNAI3Q3KNW1 292 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 TSPO2Q5TGU0 170 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 ZNF774Q6NX45 483 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 ADGRE4PQ86SQ3 457 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 PAQR4Q8N4S7 273 aaPredicted RBP11.24□□□□□ -0.61
VAPB-203ENST00000463370 NKAIN3Q8N8D7 197 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 OR5D14Q8NGL3 314 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 PGAM5Q96HS1 289 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 TMEM138Q9NPI0 162 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 RABL2AQ9UBK7 228 aaPredicted RBP11.24□□□□□ -0.61
VAPB-203ENST00000463370 RABL2BQ9UNT1 228 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 FLVCR2Q9UPI3 526 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 NCOA6Q14686 2063 aaPredicted RBP11.24□□□□□ -0.61
VAPB-203ENST00000463370 RTTNQ86VV8 2226 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 MUC6Q6W4X9 2439 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 KIAA1549Q9HCM3 1950 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 IGKV1-9A0A0C4DH69 117 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 WIPF3A6NGB9 483 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 IGLV3-1P01715 115 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 ZNF20P17024 532 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 RAB3AP20336 220 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 UNC119Q13432 240 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 RTN4RL2Q86UN3 420 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 TUSC5Q8IXB3 177 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 OR14K1Q8NGZ2 314 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 AKR7LQ8NHP1 331 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 CPT1CQ8TCG5 803 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 FAM46BQ96A09 425 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 CYYR1Q96J86 154 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 SORCS2Q96PQ0 1159 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 GPR35Q9HC97 309 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 SLC17A5Q9NRA2 495 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 MCUBQ9NWR8 336 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 KLF13Q9Y2Y9 288 aaPredicted RBP11.23□□□□□ -0.61
VAPB-203ENST00000463370 AKAP13Q12802 2813 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 LINC01387J3KSC0 135 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 M0R135 149 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 TRAPPC2P0DI81 140 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 TRAPPC2BP0DI82 140 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 ZNF32P17041 273 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 CD82P27701 267 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 ARG2P78540 354 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 PMP22Q01453 160 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 CBX3Q13185 183 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 ZNF627Q7L945 461 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 ZFP62Q8NB50 900 aaPredicted RBP11.23□□□□□ -0.61
VAPB-203ENST00000463370 OR4D10Q8NGI6 311 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 ZNF799Q96GE5 643 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 MS4A3Q96HJ5 214 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 FOXB1Q99853 325 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 DEFB127Q9H1M4 99 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 BEX1Q9HBH7 125 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 DIABLOQ9NR28 239 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 NKIRAS2Q9NYR9 191 aa11.23□□□□□ -0.61
VAPB-203ENST00000463370 SYNGR3O43761 229 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 GABRA1P14867 456 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 CRYGSP22914 178 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 CCL11P51671 97 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 FOXG1P55316 489 aaPredicted RBP11.22□□□□□ -0.61
VAPB-203ENST00000463370 MRPS10P82664 201 aaKnown RBP11.22□□□□□ -0.61
VAPB-203ENST00000463370 QRFPP83859 136 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 PMPCAQ10713 525 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 C9orf135Q5VTT2 229 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 DOK3Q7L591 496 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 SKA3Q8IX90 412 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 SLC22A24Q8N4F4 322 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 ZBTB8BQ8NAP8 495 aaPredicted RBP11.22□□□□□ -0.61
VAPB-203ENST00000463370 ACBD4Q8NC06 268 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 CMBLQ96DG6 245 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 METTL17Q9H7H0 456 aaPredicted RBP11.22□□□□□ -0.61
VAPB-203ENST00000463370 NEK6Q9HC98 313 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 SLC7A10Q9NS82 523 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 NOSIPQ9Y314 301 aaKnown RBP11.22□□□□□ -0.61
VAPB-203ENST00000463370 NUBP2Q9Y5Y2 271 aa11.22□□□□□ -0.61
VAPB-203ENST00000463370 IGKV3D-15A0A087WSY6 115 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 KLRC4-KLRK1H3BQV0 150 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 H7C417 338 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 ZNHIT1O43257 154 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 SGCEO43556 437 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 WISP2O76076 250 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 CST2P09228 141 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 VSIG8P0DPA2 414 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 LIPCP11150 499 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 ZNF93P35789 620 aaPredicted RBP11.21□□□□□ -0.61
VAPB-203ENST00000463370 BTG1P62324 171 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 ZNF766Q5HY98 468 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 PDSS1Q5T2R2 415 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 BEST4Q8NFU0 473 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 FDCSPQ8NFU4 85 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 OR2AE1Q8NHA4 323 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 C7orf50Q9BRJ6 194 aaKnown RBP11.21□□□□□ -0.61
VAPB-203ENST00000463370 TP63Q9H3D4 680 aaPredicted RBP11.21□□□□□ -0.61
VAPB-203ENST00000463370 CALHM2Q9HA72 323 aa11.21□□□□□ -0.61
VAPB-203ENST00000463370 PAQR5Q9NXK6 330 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms