RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 MALLQ13021 153 aa12.38□□□□□ -0.43
APP-211ENST00000462267 MICBQ29980 383 aa12.38□□□□□ -0.43
APP-211ENST00000462267 CASC10Q5T4H9 136 aa12.38□□□□□ -0.43
APP-211ENST00000462267 PATL1Q86TB9 770 aaKnown RBP12.38□□□□□ -0.43
APP-211ENST00000462267 C17orf50Q8WW18 174 aa12.38□□□□□ -0.43
APP-211ENST00000462267 ACOT11Q8WXI4 607 aaPredicted RBP12.38□□□□□ -0.43
APP-211ENST00000462267 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.38□□□□□ -0.43
APP-211ENST00000462267 DPF1Q92782 380 aa12.38□□□□□ -0.43
APP-211ENST00000462267 CCL13Q99616 98 aa12.38□□□□□ -0.43
APP-211ENST00000462267 DCTN5Q9BTE1 182 aa12.38□□□□□ -0.43
APP-211ENST00000462267 GPR61Q9BZJ8 451 aa12.38□□□□□ -0.43
APP-211ENST00000462267 POLR2J2Q9GZM3 115 aaKnown RBP12.38□□□□□ -0.43
APP-211ENST00000462267 WNT10AQ9GZT5 417 aa12.38□□□□□ -0.43
APP-211ENST00000462267 HDHD2Q9H0R4 259 aa12.38□□□□□ -0.43
APP-211ENST00000462267 POLR2J3Q9H1A7 115 aaKnown RBP12.38□□□□□ -0.43
APP-211ENST00000462267 SSU72Q9NP77 194 aaKnown RBP12.38□□□□□ -0.43
APP-211ENST00000462267 PRPF19Q9UMS4 504 aaKnown RBP12.38□□□□□ -0.43
APP-211ENST00000462267 DNAH1Q9P2D7 4330 aa12.38□□□□□ -0.43
APP-211ENST00000462267 IGHV3OR15-7A0A075B7D8 119 aa12.37□□□□□ -0.43
APP-211ENST00000462267 M0R1W7 72 aa12.37□□□□□ -0.43
APP-211ENST00000462267 NDUFB3O43676 98 aa12.37□□□□□ -0.43
APP-211ENST00000462267 OR5F1O95221 314 aa12.37□□□□□ -0.43
APP-211ENST00000462267 KITP10721 976 aa12.37□□□□□ -0.43
APP-211ENST00000462267 MUC1P15941 1255 aaPredicted RBP12.37□□□□□ -0.43
APP-211ENST00000462267 HOXD3P31249 432 aaPredicted RBP12.37□□□□□ -0.43
APP-211ENST00000462267 CD83Q01151 205 aa12.37□□□□□ -0.43
APP-211ENST00000462267 ANKDD1AQ495B1 522 aa12.37□□□□□ -0.43
APP-211ENST00000462267 PAGE3Q5JUK9 113 aa12.37□□□□□ -0.43
APP-211ENST00000462267 ZNF826PQ6ZT77 177 aa12.37□□□□□ -0.43
APP-211ENST00000462267 PGAP1Q75T13 922 aa12.37□□□□□ -0.43
APP-211ENST00000462267 GJC3Q8NFK1 279 aa12.37□□□□□ -0.43
APP-211ENST00000462267 SLC26A7Q8TE54 656 aa12.37□□□□□ -0.43
APP-211ENST00000462267 RASSF5Q8WWW0 418 aa12.37□□□□□ -0.43
APP-211ENST00000462267 SLCO4A1Q96BD0 722 aa12.37□□□□□ -0.43
APP-211ENST00000462267 AJUBAQ96IF1 538 aa12.37□□□□□ -0.43
APP-211ENST00000462267 ADAT1Q9BUB4 502 aaKnown RBP12.37□□□□□ -0.43
APP-211ENST00000462267 THAP1Q9NVV9 213 aa12.37□□□□□ -0.43
APP-211ENST00000462267 RIMS3Q9UJD0 308 aa12.37□□□□□ -0.43
APP-211ENST00000462267 A0A1B0GW55 424 aa12.36□□□□□ -0.43
APP-211ENST00000462267 hCG_1807616A0A1W2PRN6 198 aa12.36□□□□□ -0.43
APP-211ENST00000462267 A0A1W2PRX2 142 aa12.36□□□□□ -0.43
APP-211ENST00000462267 A6NLC8 198 aa12.36□□□□□ -0.43
APP-211ENST00000462267 XKRYO14609 159 aa12.36□□□□□ -0.43
APP-211ENST00000462267 DUX4L2P0CJ85 424 aa12.36□□□□□ -0.43
APP-211ENST00000462267 DUX4L3P0CJ86 424 aa12.36□□□□□ -0.43
APP-211ENST00000462267 DUX4L4P0CJ87 422 aa12.36□□□□□ -0.43
APP-211ENST00000462267 DUX4L5P0CJ88 424 aa12.36□□□□□ -0.43
APP-211ENST00000462267 DUX4L6P0CJ89 424 aa12.36□□□□□ -0.43
APP-211ENST00000462267 DUX4L7P0CJ90 424 aa12.36□□□□□ -0.43
APP-211ENST00000462267 CTLA4P16410 223 aa12.36□□□□□ -0.43
APP-211ENST00000462267 PAICSP22234 425 aaKnown RBP12.36□□□□□ -0.43
APP-211ENST00000462267 MRPL19P49406 292 aaKnown RBP12.36□□□□□ -0.43
APP-211ENST00000462267 HIST1H3AP68431 136 aa12.36□□□□□ -0.43
APP-211ENST00000462267 CYP51A1Q16850 503 aa12.36□□□□□ -0.43
APP-211ENST00000462267 LRRC10Q5BKY1 277 aa12.36□□□□□ -0.43
APP-211ENST00000462267 WDR38Q5JTN6 314 aa12.36□□□□□ -0.43
APP-211ENST00000462267 HIST2H3PS2Q5TEC6 136 aa12.36□□□□□ -0.43
APP-211ENST00000462267 OTPQ5XKR4 325 aa12.36□□□□□ -0.43
APP-211ENST00000462267 BLOC1S3Q6QNY0 202 aa12.36□□□□□ -0.43
APP-211ENST00000462267 DUX4L9Q6RFH8 374 aaPredicted RBP12.36□□□□□ -0.43
APP-211ENST00000462267 HIST2H3AQ71DI3 136 aa12.36□□□□□ -0.43
APP-211ENST00000462267 GLB1L2Q8IW92 636 aa12.36□□□□□ -0.43
APP-211ENST00000462267 TAMM41Q96BW9 452 aa12.36□□□□□ -0.43
APP-211ENST00000462267 BPIFA2Q96DR5 249 aa12.36□□□□□ -0.43
APP-211ENST00000462267 SPDL1Q96EA4 605 aa12.36□□□□□ -0.43
APP-211ENST00000462267 OR52B2Q96RD2 323 aa12.36□□□□□ -0.43
APP-211ENST00000462267 CDCA4Q9BXL8 241 aa12.36□□□□□ -0.43
APP-211ENST00000462267 GRHPRQ9UBQ7 328 aa12.36□□□□□ -0.43
APP-211ENST00000462267 DUX4Q9UBX2 424 aa12.36□□□□□ -0.43
APP-211ENST00000462267 POLR1DQ9Y2S0 133 aa12.36□□□□□ -0.43
APP-211ENST00000462267 PRSS37A4D1T9 235 aa12.35□□□□□ -0.43
APP-211ENST00000462267 CD300LBA8K4G0 201 aa12.35□□□□□ -0.43
APP-211ENST00000462267 ZFPL1O95159 310 aa12.35□□□□□ -0.43
APP-211ENST00000462267 GRPP07492 148 aa12.35□□□□□ -0.43
APP-211ENST00000462267 BMXP51813 675 aa12.35□□□□□ -0.43
APP-211ENST00000462267 STX1BP61266 288 aa12.35□□□□□ -0.43
APP-211ENST00000462267 MZT1Q08AG7 82 aa12.35□□□□□ -0.43
APP-211ENST00000462267 ECH1Q13011 328 aa12.35□□□□□ -0.43
APP-211ENST00000462267 BLMHQ13867 455 aa12.35□□□□□ -0.43
APP-211ENST00000462267 KCNMB1Q16558 191 aa12.35□□□□□ -0.43
APP-211ENST00000462267 RSPO1Q2MKA7 263 aaPredicted RBP12.35□□□□□ -0.43
APP-211ENST00000462267 KRTAP27-1Q3LI81 207 aa12.35□□□□□ -0.43
APP-211ENST00000462267 MRPL21Q7Z2W9 205 aaKnown RBP12.35□□□□□ -0.43
APP-211ENST00000462267 FUNDC1Q8IVP5 155 aa12.35□□□□□ -0.43
APP-211ENST00000462267 FAM216BQ8N7L0 139 aa12.35□□□□□ -0.43
APP-211ENST00000462267 OR51A7Q8NH64 312 aa12.35□□□□□ -0.43
APP-211ENST00000462267 MUC7Q8TAX7 377 aa12.35□□□□□ -0.43
APP-211ENST00000462267 PIFOQ8TCI5 191 aa12.35□□□□□ -0.43
APP-211ENST00000462267 PRSS22Q9GZN4 317 aa12.35□□□□□ -0.43
APP-211ENST00000462267 RNPEPL1Q9HAU8 725 aa12.35□□□□□ -0.43
APP-211ENST00000462267 TRAV27A0A087WT01 109 aa12.34□□□□□ -0.43
APP-211ENST00000462267 LCE6AA0A183 80 aa12.34□□□□□ -0.43
APP-211ENST00000462267 SNNO75324 88 aaPredicted RBP12.34□□□□□ -0.43
APP-211ENST00000462267 KHDRBS3O75525 346 aaKnown RBP12.34□□□□□ -0.43
APP-211ENST00000462267 CLIC3O95833 236 aa12.34□□□□□ -0.43
APP-211ENST00000462267 ACSM4P0C7M7 580 aa12.34□□□□□ -0.43
APP-211ENST00000462267 IFI30P13284 250 aa12.34□□□□□ -0.43
APP-211ENST00000462267 LMO1P25800 156 aa12.34□□□□□ -0.43
APP-211ENST00000462267 TGM4P49221 684 aa12.34□□□□□ -0.43
APP-211ENST00000462267 PIN1Q13526 163 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms