RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 MMP16P51512 607 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 AQP4P55087 323 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 HLXQ14774 488 aaPredicted RBP9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 KLHL22Q53GT1 634 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 TMEM255AQ5JRV8 349 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 FAM209AQ5JX71 171 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 GLYATL3Q5SZD4 288 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 SPNS3Q6ZMD2 512 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 USP51Q70EK9 711 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 FAM57BQ71RH2 274 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 PRSS45Q7RTY3 260 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 RFLNBQ8N5W9 214 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 SPSB4Q96A44 273 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 LGALS12Q96DT0 336 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 MRPL48Q96GC5 212 aaKnown RBP9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 PGAM5Q96HS1 289 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 DIRC2Q96SL1 478 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 TBX5Q99593 518 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 TTTY10Q9BZA0 68 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 TPK1Q9H3S4 243 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 RGCCQ9H4X1 137 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 MRPS18AQ9NVS2 196 aaKnown RBP9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 NKIRAS2Q9NYR9 191 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 AASSQ9UDR5 926 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ZNF391Q9UJN7 358 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ZDHHC8Q9ULC8 765 aa9.96□□□□□ -0.82
TRAF3IP1-204ENST00000462122 TMEM269A0A1B0GVZ9 245 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 DAPL1A0PJW8 107 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 IRGMA1A4Y4 181 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 METTL15A6NJ78 407 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 IQCF6A8MYZ5 107 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 PSMD9O00233 223 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 TBX1O43435 398 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 SSX4O60224 188 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 SULT1C4O75897 302 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ADH4P08319 380 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 GNAO1P09471 354 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 CSF3P09919 207 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 VHLP40337 213 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 DSCR9P59020 149 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ACTA2P62736 377 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ACTG2P63267 376 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ZNF92Q03936 586 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 TIGD6Q17RP2 521 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ALKBH6Q3KRA9 238 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 OR2T2Q6IF00 324 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 CLEC2AQ6UVW9 174 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 IZUMO2Q6UXV1 221 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 PLEKHG7Q6ZR37 379 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 FAM220AQ7Z4H9 259 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 KCTD20Q7Z5Y7 419 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 THAP5Q7Z6K1 395 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 KRTAP1-3Q8IUG1 177 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 EGFL6Q8IUX8 553 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ACBD7Q8N6N7 88 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 OR8G5Q8NG78 346 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 CNIH3Q8TBE1 160 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 REEP6Q96HR9 211 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 REPIN1Q9BWE0 567 aaKnown RBP9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 AMBNQ9NP70 447 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 INPP5EQ9NRR6 644 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 FAM206AQ9NX38 181 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 MRM2Q9UI43 246 aaKnown RBP9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 N6AMT1Q9Y5N5 214 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ARID1AO14497 2285 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 CELSR1Q9NYQ6 3014 aa9.95□□□□□ -0.82
TRAF3IP1-204ENST00000462122 PRRC2AP48634 2157 aaKnown RBP9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ARFGEF3Q5TH69 2177 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ZSCAN5BA6NJL1 495 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 IGHA1P01876 353 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 TNFSF4P23510 183 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 DDOSTP39656 456 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ZNF85Q03923 595 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 CDK5R2Q13319 367 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 SNCBQ16143 134 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 SMN1Q16637 294 aaKnown RBP9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 CLEC12BQ2HXU8 276 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 CDONQ4KMG0 1287 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 C6orf52Q5T4I8 152 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ZNF684Q5T5D7 378 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 SSX6Q7RTT6 188 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 OR5AS1Q8N127 324 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ZCCHC24Q8N2G6 241 aaKnown RBP9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 YIPF7Q8N8F6 280 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 WFDC11Q8NEX6 87 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 OR8B12Q8NGG6 310 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 OR2AE1Q8NHA4 323 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 FBLIM1Q8WUP2 373 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 SPRYD4Q8WW59 207 aaPredicted RBP9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 ITFG2Q969R8 447 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 SLC22A4Q9H015 551 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 BRD7Q9NPI1 651 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 NUFIP1Q9UHK0 495 aaKnown RBP9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 NOP16Q9Y3C1 178 aaKnown RBP9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 R4GMQ9 66 aa9.94□□□□□ -0.82
TRAF3IP1-204ENST00000462122 A0A0U1RQV5 110 aa9.93□□□□□ -0.82
TRAF3IP1-204ENST00000462122 C5orf63A6NC05 138 aa9.93□□□□□ -0.82
TRAF3IP1-204ENST00000462122 GGT3PA6NGU5 568 aa9.93□□□□□ -0.82
TRAF3IP1-204ENST00000462122 CD300LBA8K4G0 201 aa9.93□□□□□ -0.82
TRAF3IP1-204ENST00000462122 LOC110117498-PIK3R3F6TDL0 507 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms