RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ZNF222Q9UK12 451 aa1.9□□□□□ -2.11
HDAC6-212ENST00000461608 HES2Q9Y543 173 aa1.9□□□□□ -2.11
HDAC6-212ENST00000461608 COMMD3-BMI1R4GMX3 469 aa1.9□□□□□ -2.11
HDAC6-212ENST00000461608 DENND4AQ7Z401 1863 aa1.9□□□□□ -2.11
HDAC6-212ENST00000461608 PTPRTO14522 1441 aa1.9□□□□□ -2.11
HDAC6-212ENST00000461608 IGKV2-28A0A075B6P5 120 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 IGKV2D-24A0A075B6R9 120 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 A0A0J9YXV3 536 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF705GA8MUZ8 300 aaPredicted RBP1.89□□□□□ -2.11
HDAC6-212ENST00000461608 GABRPO00591 440 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 NME4O00746 187 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 ZBTB5O15062 677 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 RTL8CO15255 209 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 MPDU1O75352 247 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 ENTPD5O75356 428 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 IGKV2D-28P01615 120 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 KLK1P06870 262 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 CRYGCP07315 174 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 OR56A5P0C7T3 313 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 PGA4P0DJD7 388 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 PGA3P0DJD8 388 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 PGA5P0DJD9 388 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 SRMP19623 302 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 GABRR2P28476 465 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 NBL1P41271 181 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 CDKN2DP55273 166 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 IFITM3Q01628 133 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 SYCNQ0VAF6 134 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 SLC39A6Q13433 755 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 EBI3Q14213 229 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 STK11Q15831 433 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 C5orf47Q569G3 176 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 MLIPQ5VWP3 458 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 Q6ZVH6 145 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 NCCRP1Q6ZVX7 275 aaPredicted RBP1.89□□□□□ -2.11
HDAC6-212ENST00000461608 KRTAP5-5Q701N2 237 aaPredicted RBP1.89□□□□□ -2.11
HDAC6-212ENST00000461608 WDR86Q86TI4 376 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 ZFP41Q8N8Y5 198 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 TMEM104Q8NE00 496 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 UBALD1Q8TB05 177 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 CA5BP1Q8WTZ4 195 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 MITD1Q8WV92 249 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 SGTBQ96EQ0 304 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 AGMATQ9BSE5 352 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 RSG1Q9BU20 258 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 EMC6Q9BV81 110 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 EDA2RQ9HAV5 297 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 BEX1Q9HBH7 125 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 TMEM27Q9HBJ8 222 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 RGS18Q9NS28 235 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF355PQ9NSJ1 428 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 DDX19BQ9UMR2 479 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 RHBDD3Q9Y3P4 386 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 NACAE9PAV3 2078 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 PHLPP2Q6ZVD8 1323 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 SYNRGQ9UMZ2 1314 aa1.89□□□□□ -2.11
HDAC6-212ENST00000461608 LRP4O75096 1905 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 A0A1W2PPV4 95 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 RSPH10B2B2RC85 870 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 H3BN98 237 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 H7C1H1 209 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 SIVA1O15304 175 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 SOCS1O15524 211 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 RBFOX2O43251 390 aaKnown RBP eCLIP1.88□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF324O75467 553 aaPredicted RBP1.88□□□□□ -2.11
HDAC6-212ENST00000461608 GCM2O75603 506 aaPredicted RBP1.88□□□□□ -2.11
HDAC6-212ENST00000461608 UPK1BO75841 260 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 LCA5LO95447 670 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 IGHV3-11P01762 117 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 APCSP02743 223 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 IGKV3-11P04433 115 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF688P0C7X2 276 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 RSPH10BP0C881 870 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 CD37P11049 281 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 HOXB8P17481 243 aaPredicted RBP1.88□□□□□ -2.11
HDAC6-212ENST00000461608 CSKP41240 450 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 RAB7AP51149 207 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 PSMC5P62195 406 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 CACNG7P62955 275 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 CRADDP78560 199 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 LCN2P80188 198 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 CDK5Q00535 292 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 SLAQ13239 276 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 FAM83EQ2M2I3 478 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 Q5W150 140 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 NTM-AS1Q6ZSK4 140 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 RIMKLAQ8IXN7 391 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 TRAM1L1Q8N609 369 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 CSGALNACT2Q8N6G5 542 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 LINC00469Q8N7U9 141 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 OR13C9Q8NGT0 318 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 OR9A2Q8NGT5 310 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 OR6K6Q8NGW6 343 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 LILRB4Q8NHJ6 448 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 SYNPRQ8TBG9 265 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 ENKURQ8TC29 256 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 ASZ1Q8WWH4 475 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 FRZBQ92765 325 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 FLYWCH2Q96CP2 140 aaKnown RBP1.88□□□□□ -2.11
HDAC6-212ENST00000461608 RNF145Q96MT1 663 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms