RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 VSTM2LQ96N03 204 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 C12orf10Q9HB07 376 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 MTFP1Q9UDX5 166 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 ARID1AO14497 2285 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 RGPD4Q7Z3J3 1758 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 TAAR5O14804 337 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 TUSC2O75896 110 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 CDAP32320 146 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 MAGEB1P43366 347 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 FMODQ06828 376 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 PDLIM3Q53GG5 364 aaPredicted RBP13.28□□□□□ -0.28
PTPRU-205ENST00000460170 LHFPL2Q6ZUX7 228 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 SLC30A7Q8NEW0 376 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 GPR160Q9UJ42 338 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 GPANK1O95872 356 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 TBC1D28Q2M2D7 210 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 FAM122CQ6P4D5 195 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 WDSUB1Q8N9V3 476 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 ZNF416Q9BWM5 594 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 BARHL1Q9BZE3 327 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 GCM1Q9NP62 436 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 PCOLCE2Q9UKZ9 415 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 FLVCR1Q9Y5Y0 555 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 A0A1B0GTH9 108 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 SHISA8B8ZZ34 492 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 CLDN1O95832 211 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 CTXN2P0C2S0 81 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 DUSP1P28562 367 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 RAB4BP61018 213 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 ELFN2Q5R3F8 820 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 H3F3CQ6NXT2 135 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 LSMEM1Q8N8F7 131 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 TEX19Q8NA77 164 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 RELL2Q8NC24 303 aaPredicted RBP13.28□□□□□ -0.28
PTPRU-205ENST00000460170 PPP1R1CQ8WVI7 109 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 GPA33Q99795 319 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 SLCO1B1Q9Y6L6 691 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 CYR61O00622 381 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 DEGS1O15121 323 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 NKX2-1P43699 371 aaPredicted RBP13.27□□□□□ -0.28
PTPRU-205ENST00000460170 TAGLNQ01995 201 aaKnown RBP13.27□□□□□ -0.28
PTPRU-205ENST00000460170 ST3GAL2Q16842 350 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 ATPAF1Q5TC12 328 aaPredicted RBP13.27□□□□□ -0.28
PTPRU-205ENST00000460170 DEGS2Q6QHC5 323 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 OIT3Q8WWZ8 545 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 REEP6Q96HR9 211 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 MIXL1Q9H2W2 232 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 TDRD15B5MCY1 1934 aaKnown RBP13.27□□□□□ -0.28
PTPRU-205ENST00000460170 ARID2Q68CP9 1835 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 IGHV1OR15-9A0A0B4J2B8 117 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 JTBO76095 146 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 OR5H8P0DN80 308 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 SCAND1P57086 179 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 FRZBQ92765 325 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 SSX3Q99909 188 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 TINAGL1Q9GZM7 467 aaPredicted RBP13.27□□□□□ -0.28
PTPRU-205ENST00000460170 RNF32Q9H0A6 362 aa13.27□□□□□ -0.28
PTPRU-205ENST00000460170 OR6C65A6NJZ3 312 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 PTPRZ1P23471 2315 aaPredicted RBP13.27□□□□□ -0.29
PTPRU-205ENST00000460170 DUSP2Q05923 314 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 ANKRD16Q6P6B7 361 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 CARFQ8N187 725 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 DMBX1Q8NFW5 382 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 SP7Q8TDD2 431 aaPredicted RBP13.27□□□□□ -0.29
PTPRU-205ENST00000460170 KCNJ15Q99712 375 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 PRMT8Q9NR22 394 aaPredicted RBP13.27□□□□□ -0.29
PTPRU-205ENST00000460170 TUBAL3A6NHL2 446 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 HSD17B6O14756 317 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 XRCC2O43543 280 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 EDN3P14138 238 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 BAMBIQ13145 260 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 MRPL41Q8IXM3 137 aaKnown RBP13.27□□□□□ -0.29
PTPRU-205ENST00000460170 OR4S1Q8NGB4 309 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 TERB2Q8NHR7 220 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 TCEAL7Q9BRU2 100 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 PLEKHF2Q9H8W4 249 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 CES1P1Q9UKY3 287 aa13.27□□□□□ -0.29
PTPRU-205ENST00000460170 TNFSF11O14788 317 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 OGG1O15527 345 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 SERPINA7P05543 415 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 VHLLQ6RSH7 139 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 OR10J5Q8NHC4 309 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 PP6455Q8WZ26 134 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 MEIKINA0A087WXM9 373 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 LRP5LA4QPB2 252 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 FAHP16930 419 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 UBALD2Q8IYN6 164 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 GALNT16Q8N428 558 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 ST8SIA4Q92187 359 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 CABIN1Q9Y6J0 2220 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 A0A0U1RQK1 487 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 A8MXE2 369 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 SLC6A1P30531 599 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 CLN3Q13286 438 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 PNLIPRP3Q17RR3 467 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 HLA-BQ31612 363 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 ZAR1Q86SH2 424 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 LANCL2Q9NS86 450 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 ZNF629Q9UEG4 869 aaPredicted RBP13.26□□□□□ -0.29
PTPRU-205ENST00000460170 DUSP13Q9UII6 198 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms