RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 UCK2Q9BZX2 261 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 NXF2Q9GZY0 626 aaKnown RBP2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 ATG10Q9H0Y0 220 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 LINC00597Q9H2U6 94 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 RIBC2Q9H4K1 309 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 SRD5A3Q9H8P0 318 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 MARCH7Q9H992 704 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 NMNAT1Q9HAN9 279 aaPredicted RBP2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 FGF20Q9NP95 211 aaPredicted RBP2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 FANCFQ9NPI8 374 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 ACOT13Q9NPJ3 140 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 CLEC5AQ9NY25 188 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 EMC3Q9P0I2 261 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 PDP1Q9P0J1 537 aaPredicted RBP2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 COPZ2Q9P299 210 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 ZNF319Q9P2F9 582 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 WARS2Q9UGM6 360 aaKnown RBP2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 PSORS1C1Q9UIG5 152 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 IKZF3Q9UKT9 509 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 CES1P1Q9UKY3 287 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 CLEC4EQ9ULY5 219 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 ABCG2Q9UNQ0 655 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 DIMT1Q9UNQ2 313 aaKnown RBP2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 MOKQ9UQ07 419 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 TRAPPC4Q9Y296 219 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 TMEM14AQ9Y6G1 99 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 BRCA2P51587 3418 aa2.77□□□□□ -1.97
SSX2IP-204ENST00000459708 ZFC3H1O60293 1989 aaKnown RBP2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 ALPK3Q96L96 1907 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 TRAPPC13A5PLN9 417 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 A8MU10 97 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 H3BMQ9 156 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 HMGN4O00479 90 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 MYL12BO14950 172 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 LRRTM2O43300 516 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 ERI3O43414 337 aaKnown RBP2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 OR1F1O43749 312 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 OR2T1O43869 369 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 CDC40O60508 579 aaKnown RBP eCLIP2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 EIF4E2O60573 245 aaKnown RBP2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 HCN1O60741 890 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 CTNSO60931 367 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 BCAS1O75363 584 aaPredicted RBP2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 GATBO75879 557 aaKnown RBP2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 ARL6IP5O75915 188 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 SCGNO76038 276 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 SNAP29O95721 258 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 LDOC1O95751 146 aaPredicted RBP2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 RAB36O95755 333 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 MT-ATP6P00846 226 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 APOA1P02647 267 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 KLK1P06870 262 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 GP1BAP07359 652 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 CTSEP14091 401 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 CPMP14384 443 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 ZNF3P17036 446 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 DRD5P21918 477 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 PCMT1P22061 227 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 PAX7P23759 505 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 GSSP48637 474 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 DUSP3P51452 185 aaPredicted RBP2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 TPMTP51580 245 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 CRISP1P54107 249 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 RAG2P55895 527 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 WNT4P56705 351 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 RAB25P57735 213 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 VLDLRP98155 873 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 CDK5Q00535 292 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 IL5RAQ01344 420 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 SSBP1Q04837 148 aaKnown RBP2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 CD47Q08722 323 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 FUT7Q11130 342 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 CDC20Q12834 499 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 TPBGQ13641 420 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 DDX39BQ13838 428 aaKnown RBP2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 STK11Q15831 433 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 ZNF141Q15928 474 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 PCK2Q16822 640 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 LRRC36Q1X8D7 754 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 RGS21Q2M5E4 152 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 ZNF404Q494X3 552 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 C12orf73Q69YU5 71 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 XAF1Q6GPH4 301 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 ULK3Q6PHR2 472 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 XKRXQ6PP77 449 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 DEGS2Q6QHC5 323 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 NHLRC1Q6VVB1 395 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 TMPRSS11AQ6ZMR5 421 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 ZNF730Q6ZMV8 503 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 MBOAT2Q6ZWT7 520 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 C16orf62Q7Z3J2 963 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 ZNF619Q8N2I2 560 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 STX19Q8N4C7 294 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 KRTCAP2Q8N6L1 136 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 RNF148Q8N7C7 305 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 LINC01555Q8NAE3 123 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 OR5AR1Q8NGP9 310 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 OR10G6Q8NH81 332 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 C8orf46Q8TAG6 207 aa2.76□□□□□ -1.97
SSX2IP-204ENST00000459708 FBXO30Q8TB52 745 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms