RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 GLYATL3Q5SZD4 288 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 SHFQ7M4L6 423 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 MOGAT3Q86VF5 341 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 DNAJC9Q8WXX5 260 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 ZMYND19Q96E35 227 aaPredicted RBP13.68□□□□□ -0.22
CPSF6-203ENST00000456847 PAPOLBQ9NRJ5 636 aaKnown RBP13.68□□□□□ -0.22
CPSF6-203ENST00000456847 A0A0G2JMP0 313 aa13.67□□□□□ -0.22
CPSF6-203ENST00000456847 A0A0X1KG70 313 aa13.67□□□□□ -0.22
CPSF6-203ENST00000456847 ANXA2P07355 339 aaKnown RBP13.67□□□□□ -0.22
CPSF6-203ENST00000456847 THBS2P35442 1172 aa13.67□□□□□ -0.22
CPSF6-203ENST00000456847 CX3CR1P49238 355 aa13.67□□□□□ -0.22
CPSF6-203ENST00000456847 LCN2P80188 198 aa13.67□□□□□ -0.22
CPSF6-203ENST00000456847 ZNF92Q03936 586 aa13.67□□□□□ -0.22
CPSF6-203ENST00000456847 OR8G1Q15617 311 aa13.67□□□□□ -0.22
CPSF6-203ENST00000456847 C1orf146Q5VVC0 180 aa13.67□□□□□ -0.22
CPSF6-203ENST00000456847 DCAF12L2Q5VW00 463 aa13.67□□□□□ -0.22
CPSF6-203ENST00000456847 OR4M2Q8NGB6 313 aa13.67□□□□□ -0.22
CPSF6-203ENST00000456847 NRBF2Q96F24 287 aa13.67□□□□□ -0.22
CPSF6-203ENST00000456847 SIGLEC11Q96RL6 698 aa13.67□□□□□ -0.22
CPSF6-203ENST00000456847 TOR3AQ9H497 397 aa13.67□□□□□ -0.22
CPSF6-203ENST00000456847 METTL17Q9H7H0 456 aaPredicted RBP13.67□□□□□ -0.22
CPSF6-203ENST00000456847 NOP16Q9Y3C1 178 aaKnown RBP13.67□□□□□ -0.22
CPSF6-203ENST00000456847 LRRC30A6NM36 301 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 CD300LBA8K4G0 201 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 TMEM178BH3BS89 294 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 XRCC2O43543 280 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 CYB5R3P00387 301 aaPredicted RBP13.66□□□□□ -0.22
CPSF6-203ENST00000456847 IRF2P14316 349 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 MDH2P40926 338 aaKnown RBP13.66□□□□□ -0.22
CPSF6-203ENST00000456847 CDK5Q00535 292 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 ZMYND11Q15326 602 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 TMEM155Q4W5P6 130 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 TMEM236Q5W0B7 351 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 OR5K1Q8NHB7 308 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 ADAT1Q9BUB4 502 aaKnown RBP13.66□□□□□ -0.22
CPSF6-203ENST00000456847 ABHD6Q9BV23 337 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 SLC25A19Q9HC21 320 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 G6PC2Q9NQR9 355 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 DNAJC27Q9NZQ0 273 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 METRNQ9UJH8 293 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 SELENOFO60613 162 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 CA6P23280 308 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 TIGD6Q17RP2 521 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 CPOQ8IVL8 374 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 C1orf87Q8N0U7 546 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 MUC20Q8N307 709 aaPredicted RBP13.66□□□□□ -0.22
CPSF6-203ENST00000456847 TEX29Q8N6K0 151 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 SLC22A4Q9H015 551 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 MMADHCQ9H3L0 296 aaPredicted RBP13.66□□□□□ -0.22
CPSF6-203ENST00000456847 OPA3Q9H6K4 179 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 SP140LQ9H930 580 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 MARCH7Q9H992 704 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 NTN4Q9HB63 628 aa13.66□□□□□ -0.22
CPSF6-203ENST00000456847 C5orf63A6NC05 138 aa13.65□□□□□ -0.22
CPSF6-203ENST00000456847 PRODHO43272 600 aa13.65□□□□□ -0.22
CPSF6-203ENST00000456847 FOXH1O75593 365 aa13.65□□□□□ -0.22
CPSF6-203ENST00000456847 CIB2O75838 187 aa13.65□□□□□ -0.22
CPSF6-203ENST00000456847 APOC1P02654 83 aa13.65□□□□□ -0.22
CPSF6-203ENST00000456847 H2BFMP0C1H6 154 aa13.65□□□□□ -0.22
CPSF6-203ENST00000456847 ANOS1P23352 680 aa13.65□□□□□ -0.22
CPSF6-203ENST00000456847 NAA10P41227 235 aaPredicted RBP13.65□□□□□ -0.22
CPSF6-203ENST00000456847 SNAPC1Q16533 368 aa13.65□□□□□ -0.22
CPSF6-203ENST00000456847 LRRC28Q86X40 367 aaPredicted RBP13.65□□□□□ -0.22
CPSF6-203ENST00000456847 TIGD4Q8IY51 512 aa13.65□□□□□ -0.22
CPSF6-203ENST00000456847 OR11L1Q8NGX0 322 aa13.65□□□□□ -0.22
CPSF6-203ENST00000456847 RNF133Q8WVZ7 376 aa13.65□□□□□ -0.22
CPSF6-203ENST00000456847 UTP4Q969X6 686 aaKnown RBP13.65□□□□□ -0.22
CPSF6-203ENST00000456847 PATZ1Q9HBE1 687 aaKnown RBP13.65□□□□□ -0.22
CPSF6-203ENST00000456847 TVP23BQ9NYZ1 205 aa13.65□□□□□ -0.22
CPSF6-203ENST00000456847 ZNF205O95201 554 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 LYNP07948 512 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 CRISP1P54107 249 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 SRSF2Q01130 221 aaKnown RBP13.64□□□□□ -0.23
CPSF6-203ENST00000456847 SCGB2A2Q13296 93 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 ATP6AP1Q15904 470 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 SLC35D3Q5M8T2 416 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 PRAMEF6Q5VXH4 476 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 FAHD1Q6P587 224 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 FAM57BQ71RH2 274 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.64□□□□□ -0.23
CPSF6-203ENST00000456847 BBS1Q8NFJ9 593 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 OR56B2PQ8NGI1 322 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 THEM6Q8WUY1 208 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 AMELYQ99218 206 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 REPIN1Q9BWE0 567 aaKnown RBP13.64□□□□□ -0.23
CPSF6-203ENST00000456847 OCEL1Q9H607 264 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 BRD7Q9NPI1 651 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 KRT84Q9NSB2 600 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 LOC105371242A0A075B767 164 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 J3QLI3 93 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 FASP25445 335 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 CD200P41217 278 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 DAPP51397 102 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 APOFQ13790 326 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 GFOD2Q3B7J2 385 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 PHC2Q8IXK0 858 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 RFLNBQ8N5W9 214 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 CELF2-AS1Q8N7Q2 184 aa13.64□□□□□ -0.23
CPSF6-203ENST00000456847 DVL3Q92997 716 aaPredicted RBP13.64□□□□□ -0.23
CPSF6-203ENST00000456847 PGAM5Q96HS1 289 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms