RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 EMC6Q9BV81 110 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 FN3KRPQ9HA64 309 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 ASF1BQ9NVP2 202 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 C13orf42A0A1B0GVH6 325 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 MTRF1O75570 445 aaKnown RBP11.03□□□□□ -0.64
LINC00959-201ENST00000456581 BDKRB2P30411 391 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 FOXF1Q12946 379 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 PRAMEF20Q5VT98 475 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 GRINAQ7Z429 371 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 OR5M8Q8NGP6 311 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 ZBTB8AQ96BR9 441 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 C1orf198Q9H425 327 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 CNTD2Q9H8S5 307 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 RASL12Q9NYN1 266 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 MYOTQ9UBF9 498 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 PCDHB10Q9UN67 800 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 OR2AT4A6NND4 320 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 NDUFA2O43678 99 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 ATG12O94817 140 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 PMS2P2O95744 297 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 ACTL6AO96019 429 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 SLC2A1P11166 492 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 HRH1P35367 487 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 RPL27P61353 136 aaKnown RBP11.02□□□□□ -0.65
LINC00959-201ENST00000456581 PLEKHN1Q494U1 663 aaPredicted RBP11.02□□□□□ -0.65
LINC00959-201ENST00000456581 TEX30Q5JUR7 227 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 MRPL14Q6P1L8 145 aaKnown RBP11.02□□□□□ -0.65
LINC00959-201ENST00000456581 ETV3LQ6ZN32 361 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 TRAPPC6BQ86SZ2 158 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 CATSPERDQ86XM0 798 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 LDLRAD3Q86YD5 345 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 OR52N4Q8NGI2 321 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 MR1Q95460 341 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 NICN1Q9BSH3 213 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 ESRP2Q9H6T0 727 aaKnown RBP11.02□□□□□ -0.65
LINC00959-201ENST00000456581 MED9Q9NWA0 146 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 HPF1Q9NWY4 346 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 MBD2Q9UBB5 411 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 TMEM14AQ9Y6G1 99 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 A8MVM7 634 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 G3V3Y1 287 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 PMP2P02689 132 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 NFYBP25208 207 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 GNALP38405 381 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 RIDAP52758 137 aaKnown RBP11.02□□□□□ -0.65
LINC00959-201ENST00000456581 ACTBP60709 375 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 ACTG1P63261 375 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 UNC119Q13432 240 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 ZNF519Q8TB69 540 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 C15orf40Q8WUR7 153 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 FGGYQ96C11 551 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 CPNE2Q96FN4 548 aaPredicted RBP11.02□□□□□ -0.65
LINC00959-201ENST00000456581 POTEKPQ9BYX7 375 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 FAM117AQ9C073 453 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 PCDHB16Q9NRJ7 776 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 TNFSF18Q9UNG2 199 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 FAM96BQ9Y3D0 163 aa11.02□□□□□ -0.65
LINC00959-201ENST00000456581 PCNX2A6NKB5 2137 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 KANTRA0A1W2PQU2 76 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 ABCD4O14678 606 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 AQP8O94778 261 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 ZNF432O94892 652 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 CD96P40200 585 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 GLT8D1Q68CQ7 371 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 C11orf87Q6NUJ2 197 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 ZNF584Q8IVC4 421 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 NKX6-2Q9C056 277 aaPredicted RBP11.01□□□□□ -0.65
LINC00959-201ENST00000456581 CKLFQ9UBR5 152 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 PTRH2Q9Y3E5 179 aaKnown RBP11.01□□□□□ -0.65
LINC00959-201ENST00000456581 TMEM269A0A1B0GVZ9 245 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 A0A1W2PP11 408 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 F5H0A9 414 aaPredicted RBP11.01□□□□□ -0.65
LINC00959-201ENST00000456581 SULT1C2O00338 296 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 PLPP3O14495 311 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 AHSA1O95433 338 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 UMODP07911 640 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 MGMTP16455 207 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 PTGDSP41222 190 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 SGCBQ16585 318 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 RSPO4Q2I0M5 234 aaPredicted RBP11.01□□□□□ -0.65
LINC00959-201ENST00000456581 EMC4Q5J8M3 183 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 ADGRE4PQ86SQ3 457 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 PAQR4Q8N4S7 273 aaPredicted RBP11.01□□□□□ -0.65
LINC00959-201ENST00000456581 CLRN3Q8NCR9 226 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 NUBPLQ8TB37 319 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 RRNAD1Q96FB5 475 aaKnown RBP11.01□□□□□ -0.65
LINC00959-201ENST00000456581 SELENOIQ9C0D9 397 aa11.01□□□□□ -0.65
LINC00959-201ENST00000456581 RIF1Q5UIP0 2472 aaKnown RBP11.01□□□□□ -0.65
LINC00959-201ENST00000456581 DOCK10Q96BY6 2186 aa11□□□□□ -0.65
LINC00959-201ENST00000456581 A0A1B0GTI1 187 aa11□□□□□ -0.65
LINC00959-201ENST00000456581 OR14I1A6ND48 311 aa11□□□□□ -0.65
LINC00959-201ENST00000456581 FTCDNL1E5RQL4 147 aa11□□□□□ -0.65
LINC00959-201ENST00000456581 NTN3O00634 580 aaPredicted RBP11□□□□□ -0.65
LINC00959-201ENST00000456581 GP1BAP07359 652 aa11□□□□□ -0.65
LINC00959-201ENST00000456581 IGFBP3P17936 291 aaPredicted RBP11□□□□□ -0.65
LINC00959-201ENST00000456581 KLK2P20151 261 aa11□□□□□ -0.65
LINC00959-201ENST00000456581 CNR1P21554 472 aa11□□□□□ -0.65
LINC00959-201ENST00000456581 RPS18P62269 152 aaKnown RBP11□□□□□ -0.65
LINC00959-201ENST00000456581 PPIAP62937 165 aaKnown RBP11□□□□□ -0.65
LINC00959-201ENST00000456581 SHEQ5VZ18 495 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms