RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 UTP4Q969X6 686 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 DTD2Q96FN9 168 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 SLC23A2Q9UGH3 650 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 ANKRD17O75179 2603 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 PMS2P1A4D2B8 440 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 ANKUB1A6NFN9 424 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 AQP7P3A6NL99 342 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 DHRS7CA6NNS2 312 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 SLC2A1P11166 492 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 CTRB1P17538 263 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 VDAC1P21796 283 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 UQCRFS1P47985 274 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 CTRB2Q6GPI1 263 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 OR13C4Q8NGS5 318 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 APOBEC3GQ9HC16 384 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 EXPH5Q8NEV8 1989 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 CLDN5O00501 218 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 RPL7P18124 248 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 USF1P22415 310 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 RPS18P62269 152 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 MFAP5Q13361 173 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 BATFQ16520 125 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 PLCXD3Q63HM9 321 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 C11orf87Q6NUJ2 197 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 PELI3Q8N2H9 469 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 SENP5Q96HI0 755 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 ADGRG7Q96K78 797 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 KIAA1456Q9P272 454 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 LHX3Q9UBR4 397 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 SLCO1B1Q9Y6L6 691 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 NUPL2O15504 423 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 C1orf105O95561 183 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 BRS3P32247 399 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 ABHD5Q8WTS1 349 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 VN1R3Q9BXE9 311 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 MFRPQ9BY79 579 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 CALHM2Q9HA72 323 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 PRRC2CQ9Y520 2896 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 TMEM262E9PQX1 116 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 RNF225M0QZC1 329 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 KLK8O60259 260 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 RPS24P62847 133 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 OR5I1Q13606 314 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 FZD2Q14332 565 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 FAM209BQ5JX69 171 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 IL20RBQ6UXL0 311 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 HTR3DQ70Z44 454 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 H1FNTQ75WM6 255 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 ARL14EPQ8N8R7 260 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 CSF3RQ99062 836 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 PARP11Q9NR21 331 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 PTRH2Q9Y3E5 179 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 KLRG2A4D1S0 409 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 SOWAHBA6NEL2 793 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 OR5B21A6NL26 309 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 M0QZ24 198 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 CSO75390 466 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 NDUFB6O95139 128 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 F3P13726 295 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 BMP5P22003 454 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 DIO1P49895 249 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 GAB1Q13480 694 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF787Q6DD87 383 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 MRPL24Q96A35 216 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 RALYQ9UKM9 306 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 PLPP2O43688 288 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 RPLP1P05386 114 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 OR1E2P47887 323 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 GDPD3Q7L5L3 318 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 OR4F5Q8NH21 305 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 LMX1AQ8TE12 382 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 CRYGNQ8WXF5 182 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 CCDC74AQ96AQ1 378 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 CCDC74BQ96LY2 380 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 OR4F4Q96R69 305 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 SLC25A33Q9BSK2 321 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 NOX4Q9NPH5 578 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 UQCR10Q9UDW1 63 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 TGIF2-C20orf24A0A0A6YYL0 155 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 DRGXA6NNA5 263 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 LIPAP38571 399 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 VASPP50552 380 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 CMTM4Q8IZR5 234 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF687Q8N1G0 1237 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 DCBLD1Q8N8Z6 715 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 JSRP1Q96MG2 331 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 SAP30LQ9HAJ7 183 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 HEYLQ9NQ87 328 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 SERTAD4Q9NUC0 356 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 RHCGQ9UBD6 479 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 OR14J1Q9UGF5 321 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 FZD1Q9UP38 647 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 H0Y8G0 127 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 DEGS1O15121 323 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 HIST1H1EP10412 219 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 EPHA1P21709 976 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 OR10J1P30954 320 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 PNLIPRP2P54317 469 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 MS4A2Q01362 244 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 TBC1D28Q2M2D7 210 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms