RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ZNF416Q9BWM5 594 aa13.31□□□□□ -0.28
LDLR-202ENST00000455727 CHST6Q9GZX3 395 aa13.31□□□□□ -0.28
LDLR-202ENST00000455727 NELFAQ9H3P2 528 aa13.31□□□□□ -0.28
LDLR-202ENST00000455727 POFUT1Q9H488 388 aa13.31□□□□□ -0.28
LDLR-202ENST00000455727 ZNF319Q9P2F9 582 aa13.31□□□□□ -0.28
LDLR-202ENST00000455727 DKKL1Q9UK85 242 aa13.31□□□□□ -0.28
LDLR-202ENST00000455727 AUP1Q9Y679 476 aa13.31□□□□□ -0.28
LDLR-202ENST00000455727 DISC1C4P0D8 188 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 M0QYG6 137 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 DNPH1O43598 174 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 FCER2P06734 321 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 CHRM2P08172 466 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 ACP1P24666 158 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 H2BFSP57053 126 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 CDNFQ49AH0 187 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 C4orf46Q504U0 113 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 ESCO2Q56NI9 601 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 OR5AS1Q8N127 324 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 OR8H3Q8N146 312 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 BPIFB2Q8N4F0 458 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 DTWD2Q8NBA8 298 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 GJC3Q8NFK1 279 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 TNFAIP8L1Q8WVP5 186 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 NKD1Q969G9 470 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 UBQLN2Q9UHD9 624 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 GJE1A6NN92 205 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 MCRIP1C9JLW8 97 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 F5H5P2 479 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 OR4E1P0C645 316 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 ICAM2P13598 275 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 ABOP16442 354 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 SUCLG1P53597 346 aaKnown RBP13.3□□□□□ -0.28
LDLR-202ENST00000455727 HIST1H3AP68431 136 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 EXOSC2Q13868 293 aaKnown RBP13.3□□□□□ -0.28
LDLR-202ENST00000455727 OPCMLQ14982 345 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 SGCAQ16586 387 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 HIST2H3PS2Q5TEC6 136 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 AWAT2Q6E213 333 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 HIST2H3AQ71DI3 136 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 CHMP1BQ7LBR1 199 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 FJX1Q86VR8 437 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 TMEM123Q8N131 208 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 ZNF283Q8N7M2 679 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 OR9K2Q8NGE7 335 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 CITED4Q96RK1 184 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 PRRT1Q99946 306 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 PIGQQ9BRB3 760 aa13.3□□□□□ -0.28
LDLR-202ENST00000455727 COL27A1Q8IZC6 1860 aaPredicted RBP13.3□□□□□ -0.28
LDLR-202ENST00000455727 OR14I1A6ND48 311 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 OR6C65A6NJZ3 312 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 LEUTXA8MZ59 168 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 NPIPA2E9PIF3 369 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 NPIPA3F8WFD2 350 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 IGLV3-1P01715 115 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 SLC2A1P11166 492 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 CXCL2P19875 107 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 CHAF1BQ13112 559 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 FAM189A2Q15884 450 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 C2orf68Q2NKX9 166 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 CLLU1Q5K131 121 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 COMMD2Q86X83 199 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 OR10R2Q8NGX6 335 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 L7N2F9 121 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 TBPP20226 339 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 SIGLEC14Q08ET2 396 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 CLVS2Q5SYC1 327 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 ATPAF1Q5TC12 328 aaPredicted RBP13.29□□□□□ -0.28
LDLR-202ENST00000455727 FAM57BQ71RH2 274 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 TRAPPC6BQ86SZ2 158 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 CHST4Q8NCG5 386 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 OR13C8Q8NGS7 320 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 OR14K1Q8NGZ2 314 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 SSC4DQ8WTU2 575 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 ELMOD3Q96FG2 381 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 ZNF385AQ96PM9 386 aaKnown RBP13.29□□□□□ -0.28
LDLR-202ENST00000455727 SLC6A7Q99884 636 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 MAB21L2Q9Y586 359 aa13.29□□□□□ -0.28
LDLR-202ENST00000455727 A0A0U1RQV5 110 aa13.28□□□□□ -0.28
LDLR-202ENST00000455727 GOSR2O14653 212 aa13.28□□□□□ -0.28
LDLR-202ENST00000455727 P2RX3P56373 397 aa13.28□□□□□ -0.28
LDLR-202ENST00000455727 SEC61A1P61619 476 aaKnown RBP13.28□□□□□ -0.28
LDLR-202ENST00000455727 ENDOGQ14249 297 aaKnown RBP13.28□□□□□ -0.28
LDLR-202ENST00000455727 RNASE10Q5GAN6 216 aaKnown RBP13.28□□□□□ -0.28
LDLR-202ENST00000455727 PHYHD1Q5SRE7 291 aa13.28□□□□□ -0.28
LDLR-202ENST00000455727 DCAF12Q5T6F0 453 aa13.28□□□□□ -0.28
LDLR-202ENST00000455727 KCNG3Q8TAE7 436 aa13.28□□□□□ -0.28
LDLR-202ENST00000455727 NABP1Q96AH0 204 aa13.28□□□□□ -0.28
LDLR-202ENST00000455727 CMBLQ96DG6 245 aa13.28□□□□□ -0.28
LDLR-202ENST00000455727 WDR89Q96FK6 387 aaPredicted RBP13.28□□□□□ -0.28
LDLR-202ENST00000455727 C1orf147Q96MC9 270 aaPredicted RBP13.28□□□□□ -0.28
LDLR-202ENST00000455727 JSRP1Q96MG2 331 aaPredicted RBP13.28□□□□□ -0.28
LDLR-202ENST00000455727 SF3B5Q9BWJ5 86 aaKnown RBP13.28□□□□□ -0.28
LDLR-202ENST00000455727 FOXD3Q9UJU5 478 aaPredicted RBP13.28□□□□□ -0.28
LDLR-202ENST00000455727 PADI1Q9ULC6 663 aa13.28□□□□□ -0.28
LDLR-202ENST00000455727 MRPS28Q9Y2Q9 187 aaKnown RBP13.28□□□□□ -0.28
LDLR-202ENST00000455727 A0A0J9YW62 118 aa13.28□□□□□ -0.28
LDLR-202ENST00000455727 RPS10-NUDT3A0A1W2PQS6 291 aa13.28□□□□□ -0.28
LDLR-202ENST00000455727 TUBAL3A6NHL2 446 aa13.28□□□□□ -0.28
LDLR-202ENST00000455727 DHHO43323 396 aa13.28□□□□□ -0.28
LDLR-202ENST00000455727 UBBP0CG47 229 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms