RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SNRPGP62308 76 aaKnown RBP12.01□□□□□ -0.49
HDAC4-205ENST00000454542 TAF13Q15543 124 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 CARTPTQ16568 116 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 TSTQ16762 297 aaKnown RBP12.01□□□□□ -0.49
HDAC4-205ENST00000454542 LRRN1Q6UXK5 716 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 PGAP1Q75T13 922 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 MRPL21Q7Z2W9 205 aaKnown RBP12.01□□□□□ -0.49
HDAC4-205ENST00000454542 OR5AS1Q8N127 324 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 RFLNBQ8N5W9 214 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 EME1Q96AY2 570 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF582Q96NG8 517 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-205ENST00000454542 RDH12Q96NR8 316 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 OR8B4Q96RC9 309 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 CLN6Q9NWW5 311 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 WARS2Q9UGM6 360 aaKnown RBP12.01□□□□□ -0.49
HDAC4-205ENST00000454542 IL19Q9UHD0 177 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 LAMP5Q9UJQ1 280 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 TMEM14AQ9Y6G1 99 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 CSPG4Q6UVK1 2322 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 TLN2Q9Y4G6 2542 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 hCG_38984A0A1B0GV85 526 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 CD300LBA8K4G0 201 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 IGHV4-31P0DP07 118 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 ANPEPP15144 967 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 GPR6P46095 362 aaPredicted RBP12□□□□□ -0.49
HDAC4-205ENST00000454542 PRSS12P56730 875 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 TMEM33P57088 247 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 TNFAIP6P98066 277 aaPredicted RBP12□□□□□ -0.49
HDAC4-205ENST00000454542 POU4F2Q12837 409 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 RCN1Q15293 331 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 TRIP10Q15642 601 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 ZIK1Q3SY52 487 aaPredicted RBP12□□□□□ -0.49
HDAC4-205ENST00000454542 ZBTB49Q6ZSB9 765 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 OR52H1Q8NGJ2 320 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 OR13G1Q8NGZ3 307 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 THEM6Q8WUY1 208 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 ASB17Q8WXJ9 295 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 C1orf159Q96HA4 380 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 EGLN1Q9GZT9 426 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 SP140LQ9H930 580 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 DECR2Q9NUI1 292 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 DNAJC27Q9NZQ0 273 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF319Q9P2F9 582 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 CACNG2Q9Y698 323 aa12□□□□□ -0.49
HDAC4-205ENST00000454542 FN1P02751 2386 aaKnown RBP12□□□□□ -0.49
HDAC4-205ENST00000454542 ABCA1O95477 2261 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 ANKRD65E5RJM6 399 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 PHYHO14832 338 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 CASQ2O14958 399 aaPredicted RBP11.99□□□□□ -0.49
HDAC4-205ENST00000454542 SLC16A6O15403 523 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 SRSF10O75494 262 aaKnown RBP11.99□□□□□ -0.49
HDAC4-205ENST00000454542 PTBP3O95758 552 aaKnown RBP11.99□□□□□ -0.49
HDAC4-205ENST00000454542 IGLV3-1P01715 115 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 ANXA2P07355 339 aaKnown RBP11.99□□□□□ -0.49
HDAC4-205ENST00000454542 TNFSF4P23510 183 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 CHN2P52757 468 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 HCCSP53701 268 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 OR8B8Q15620 311 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 OCLNQ16625 522 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 KCTD18Q6PI47 426 aaPredicted RBP11.99□□□□□ -0.49
HDAC4-205ENST00000454542 SLC35F2Q8IXU6 374 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF679Q8IYX0 411 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 BHLHE23Q8NDY6 225 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 OR2Z1Q8NG97 314 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 OR10AD1Q8NGE0 317 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 OR51G2Q8NGK0 314 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 ITLN1Q8WWA0 313 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 HPS1Q92902 700 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 MEGF10Q96KG7 1140 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 OR2V2Q96R30 315 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 RGCCQ9H4X1 137 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 C8orf4Q9NR00 106 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 FAM206AQ9NX38 181 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 IMPAD1Q9NX62 359 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 MRPL15Q9P015 296 aaKnown RBP11.99□□□□□ -0.49
HDAC4-205ENST00000454542 H2AFY2Q9P0M6 372 aaPredicted RBP11.99□□□□□ -0.49
HDAC4-205ENST00000454542 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.99□□□□□ -0.491e-10■■■□□ 17.6
HDAC4-205ENST00000454542 NF1P21359 2839 aa11.99□□□□□ -0.49
HDAC4-205ENST00000454542 ACOD1A6NK06 481 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 CLDN25C9JDP6 229 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 CDC14BO60729 498 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF254O75437 659 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 BAG2O95816 211 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 TNFRSF1AP19438 455 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 PEX2P28328 305 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 CD200P41217 278 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 GATA4P43694 442 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 FAM3AP98173 230 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 EGR3Q06889 387 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 C6orf52Q5T4I8 152 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF684Q5T5D7 378 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 MEDAGQ5VYS4 303 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF322Q6U7Q0 402 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-205ENST00000454542 FAM57BQ71RH2 274 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 KRT77Q7Z794 578 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 ENTHD1Q8IYW4 607 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 PACRGLQ8N7B6 248 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 CELF2-AS1Q8N7Q2 184 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 OR8B12Q8NGG6 310 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 OR56B2PQ8NGI1 322 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms