RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 IFT46Q9NQC8 304 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 MCTS1Q9ULC4 181 aaKnown RBP14.04□□□□□ -0.16
SNX17-204ENST00000453453 ZNF407Q9C0G0 2248 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 IFITM5A6NNB3 132 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 MPTX1A8MV57 137 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 NPIPA2E9PIF3 369 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 NPIPA3F8WFD2 350 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 AQP7O14520 342 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 P2RY4P51582 365 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 RPS11P62280 158 aaKnown RBP eCLIP14.04□□□□□ -0.16
SNX17-204ENST00000453453 FLI1Q01543 452 aaPredicted RBP14.04□□□□□ -0.16
SNX17-204ENST00000453453 LINC00303Q3SY05 128 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 SLC35D3Q5M8T2 416 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 CDH26Q8IXH8 852 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 CYB561A3Q8NBI2 242 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 OR52I2Q8NH67 350 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 SARAFQ96BY9 339 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 PELI1Q96FA3 418 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 CNN2Q99439 309 aaKnown RBP14.04□□□□□ -0.16
SNX17-204ENST00000453453 SF3B5Q9BWJ5 86 aaKnown RBP14.04□□□□□ -0.16
SNX17-204ENST00000453453 OR10A4Q9H209 315 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 TAS2R8Q9NYW2 309 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 COQ3Q9NZJ6 369 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 SPRR3Q9UBC9 169 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 KLF2Q9Y5W3 355 aaPredicted RBP14.04□□□□□ -0.16
SNX17-204ENST00000453453 FRYQ5TBA9 3013 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 IGHV3-15A0A0B4J1V0 119 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 SMAD9O15198 467 aaKnown RBP14.03□□□□□ -0.16
SNX17-204ENST00000453453 HRGP04196 525 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 HLA-DOBP13765 273 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 RPA2P15927 270 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 RAD52P43351 418 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 PTH2RP49190 550 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 DBPQ10586 325 aaPredicted RBP14.03□□□□□ -0.16
SNX17-204ENST00000453453 MESTQ5EB52 335 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 RNASE12Q5GAN4 147 aaKnown RBP14.03□□□□□ -0.16
SNX17-204ENST00000453453 SFRP4Q6FHJ7 346 aaPredicted RBP14.03□□□□□ -0.16
SNX17-204ENST00000453453 OR5M9Q8NGP3 310 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 ZNF519Q8TB69 540 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 SMAP2Q8WU79 429 aaPredicted RBP14.03□□□□□ -0.16
SNX17-204ENST00000453453 ASB10Q8WXI3 467 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 HAVCR1Q96D42 359 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 SLC25A38Q96DW6 304 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 UCN2Q96RP3 112 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 NMNAT3Q96T66 252 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 PRRG4Q9BZD6 226 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 OR51V1Q9H2C8 321 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 PRORYQ9H606 182 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 NKIRAS2Q9NYR9 191 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 B3GAT1Q9P2W7 334 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 ZNF69Q9UC07 566 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 FOXJ3Q9UPW0 622 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 DNAJC13O75165 2243 aa14.03□□□□□ -0.16
SNX17-204ENST00000453453 ZNF814B7Z6K7 855 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 TOXO94900 526 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 UBBP0CG47 229 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 UBCP0CG48 685 aaKnown RBP14.02□□□□□ -0.16
SNX17-204ENST00000453453 RPS27AP62979 156 aaKnown RBP14.02□□□□□ -0.16
SNX17-204ENST00000453453 UBA52P62987 128 aaKnown RBP14.02□□□□□ -0.16
SNX17-204ENST00000453453 SSBP1Q04837 148 aaKnown RBP14.02□□□□□ -0.16
SNX17-204ENST00000453453 MELKQ14680 651 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 EEF1A1P5Q5VTE0 462 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 LRRN1Q6UXK5 716 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 GSG1LQ6UXU4 331 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 FCRLAQ7L513 359 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 PRSS45Q7RTY3 260 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 NPEPL1Q8NDH3 523 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 OR6K3Q8NGY3 331 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 WDYHV1Q96HA8 205 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 ADAD1Q96M93 576 aaKnown RBP14.02□□□□□ -0.16
SNX17-204ENST00000453453 SEC22CQ9BRL7 303 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 LUZP4Q9P127 313 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 KLHL13Q9P2N7 655 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 OPN4Q9UHM6 478 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 PRELID3BQ9Y3B1 194 aa14.02□□□□□ -0.16
SNX17-204ENST00000453453 CHD8Q9HCK8 2581 aa14.02□□□□□ -0.17
SNX17-204ENST00000453453 ZNF726A6NNF4 738 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 CDKN2AP42771 156 aaKnown RBP14.01□□□□□ -0.17
SNX17-204ENST00000453453 SLC16A1P53985 500 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 BIDP55957 195 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 RBMS2Q15434 407 aaKnown RBP14.01□□□□□ -0.17
SNX17-204ENST00000453453 SLC35F2Q8IXU6 374 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 OR9K2Q8NGE7 335 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 PCNPQ8WW12 178 aaKnown RBP14.01□□□□□ -0.17
SNX17-204ENST00000453453 ZNF845Q96IR2 970 aaPredicted RBP14.01□□□□□ -0.17
SNX17-204ENST00000453453 CXorf58Q96LI9 332 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 CHIAQ9BZP6 476 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 SLITRK2Q9H156 845 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 PLSCR2Q9NRY7 297 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 MED29Q9NX70 200 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 FLVCR2Q9UPI3 526 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 AK6Q9Y3D8 172 aaKnown RBP14.01□□□□□ -0.17
SNX17-204ENST00000453453 V9GY05 133 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 PRSS37A4D1T9 235 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 OR14I1A6ND48 311 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 CACNA1GO43497 2377 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 TRAF3IP2O43734 574 aaPredicted RBP14.01□□□□□ -0.17
SNX17-204ENST00000453453 RAMP1O60894 148 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 LPLP06858 475 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 MRPL3P09001 348 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms