RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 GNG8Q9UK08 70 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 MYRFQ9Y2G1 1151 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 PTPN13Q12923 2485 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 EFCAB10A6NFE3 127 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 GGT3PA6NGU5 568 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 PRR32B1ATL7 298 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 LOC110117498-PIK3R3F6TDL0 507 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 RPP14O95059 124 aaKnown RBP12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 F12P00748 615 aaPredicted RBP12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 NAT2P11245 290 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 DCKP27707 260 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZNF81P51508 661 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZNF92Q03936 586 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 TP53I3Q53FA7 332 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 C6orf141Q5SZD1 244 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZNF684Q5T5D7 378 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 LIPNQ5VXI9 398 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 OR2T2Q6IF00 324 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 EGFL6Q8IUX8 553 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZCCHC24Q8N2G6 241 aaKnown RBP12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 OR2AE1Q8NHA4 323 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 SPRYD4Q8WW59 207 aaPredicted RBP12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 NEU4Q8WWR8 484 aaPredicted RBP12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 GGHQ92820 318 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 TMEM80Q96HE8 168 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 REEP6Q96HR9 211 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 CNBD2Q96M20 576 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZNF184Q99676 751 aaPredicted RBP12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 REPIN1Q9BWE0 567 aaKnown RBP12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 PBOV1Q9GZY1 135 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 RGCCQ9H4X1 137 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 FAM206AQ9NX38 181 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 CHCHD3Q9NX63 227 aaKnown RBP12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 ERVK13-1Q9NX77 482 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 CNOT2Q9NZN8 540 aaKnown RBP12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZNF391Q9UJN7 358 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZDHHC8Q9ULC8 765 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 GTF2A1LQ9UNN4 478 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 SNX5Q9Y5X3 404 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 R4GMQ9 66 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 ASH1LQ9NR48 2969 aaKnown RBP12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 CACNA1DQ01668 2161 aa12.49□□□□□ -0.41
NCKIPSD-207ENST00000453349 FBN2P35556 2912 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 DCHS2Q6V1P9 2916 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 HECTD1Q9ULT8 2610 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 C5orf63A6NC05 138 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 C17orf100A8MU93 164 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 IQCF6A8MYZ5 107 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 J3QLW9 94 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 IGHA1P01876 353 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZNF19P17023 458 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 MYL12AP19105 171 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 MMP15P51511 669 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 EFNA4P52798 201 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 GFOD2Q3B7J2 385 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 CDONQ4KMG0 1287 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 OR5AS1Q8N127 324 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 STX19Q8N4C7 294 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZNF540Q8NDQ6 660 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 OR8G5Q8NG78 346 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 SPSB4Q96A44 273 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 SIGLEC11Q96RL6 698 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 DIRC2Q96SL1 478 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 ALG8Q9BVK2 526 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 JAM3Q9BX67 310 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 TPK1Q9H3S4 243 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 MOB1AQ9H8S9 216 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 DECR2Q9NUI1 292 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZNF319Q9P2F9 582 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 PSORS1C1Q9UIG5 152 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 OR52A1Q9UKL2 312 aa12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 EXOSC1Q9Y3B2 195 aaKnown RBP12.48□□□□□ -0.41
NCKIPSD-207ENST00000453349 DSCAMO60469 2012 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 TPD52L2O43399 206 aaKnown RBP12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 SPRY3O43610 288 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 XPNPEP2O43895 674 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 SSX4O60224 188 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 NDUFS7O75251 213 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 SRSF10O75494 262 aaKnown RBP12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 PNPP00491 289 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 PIPP12273 146 aaPredicted RBP12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 DDOSTP39656 456 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 OR12D2P58182 307 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 ST3GAL4Q11206 333 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 PCGF3Q3KNV8 242 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 TMEM255AQ5JRV8 349 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 BCL2L15Q5TBC7 163 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 SHEQ5VZ18 495 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 LAIR2Q6ISS4 152 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 PRSS57Q6UWY2 283 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 TMPRSS11AQ6ZMR5 421 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 SYS1Q8N2H4 156 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 OR8B12Q8NGG6 310 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 OR13G1Q8NGZ3 307 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 C4orf36Q96KX1 117 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 SORCS2Q96PQ0 1159 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 CXXC4Q9H2H0 198 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 TMEM100Q9NV29 134 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 NKIRAS2Q9NYR9 191 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 NUFIP1Q9UHK0 495 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms