RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 B3GALT5Q9Y2C3 310 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 DMRT1Q9Y5R6 373 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 TTC28Q96AY4 2481 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 TMEM272A0A1B0GTI8 110 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 SLC17A2O00624 439 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 APOC3P02656 99 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 S100A8P05109 93 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 CD2P06729 351 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 UMODP07911 640 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 ANXA3P12429 323 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 DNASE1L1P49184 302 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 RGS19P49795 217 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 SELENOPP49908 381 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 AP3S2P59780 193 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 TRIM61Q5EBN2 209 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 CD276Q5ZPR3 534 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 DNM1P34Q6PK57 102 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 OR8S1Q8NH09 359 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 DVL3Q92997 716 aaPredicted RBP10.73□□□□□ -0.69
COL27A1-202ENST00000451716 PDCD10Q9BUL8 212 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 REG4Q9BYZ8 158 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 CKLFQ9UBR5 152 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 SH3BGRL2Q9UJC5 107 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 CHCHD2Q9Y6H1 151 aaPredicted RBP10.73□□□□□ -0.69
COL27A1-202ENST00000451716 A0A1W2PPC1 479 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 LAMTOR5O43504 91 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 ACER2Q5QJU3 275 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 UEVLDQ8IX04 471 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 MAML2Q8IZL2 1156 aaPredicted RBP10.73□□□□□ -0.69
COL27A1-202ENST00000451716 C12orf45Q8N5I9 185 aaPredicted RBP10.73□□□□□ -0.69
COL27A1-202ENST00000451716 ELP5Q8TE02 316 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 GNRHR2Q96P88 292 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 RBP7Q96R05 134 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 POTEKPQ9BYX7 375 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 CHIAQ9BZP6 476 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 SLC26A1Q9H2B4 701 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 HEXA-AS1Q9H8Q6 139 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 HHLA2Q9UM44 414 aa10.73□□□□□ -0.69
COL27A1-202ENST00000451716 LOC100289279A0A1B0GTE1 492 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 METTL21EPA6NDL7 271 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 SLC2A1P11166 492 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 FGF5P12034 268 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 TDGF1P13385 188 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 CBR1P16152 277 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 ANOS1P23352 680 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 CLRN1P58418 232 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 CCDC157Q569K6 752 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 WDR5BQ86VZ2 330 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 OR10H5Q8NGA6 315 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 OR10S1Q8NGN2 331 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 RNASE11Q8TAA1 199 aaKnown RBP10.72□□□□□ -0.69
COL27A1-202ENST00000451716 ZNF431Q8TF32 576 aaPredicted RBP10.72□□□□□ -0.69
COL27A1-202ENST00000451716 SLAMF6Q96DU3 332 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 JSRP1Q96MG2 331 aaPredicted RBP10.72□□□□□ -0.69
COL27A1-202ENST00000451716 CDCP1Q9H5V8 836 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 DKK1O94907 266 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 TPOP07202 933 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 HTR2CP28335 458 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 MSX1P28360 303 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 NHLRC1Q6VVB1 395 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 ZNF627Q7L945 461 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 OR52B4Q8NGK2 314 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 NKD1Q969G9 470 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 CPNE4Q96A23 557 aaPredicted RBP10.72□□□□□ -0.69
COL27A1-202ENST00000451716 SLC25A28Q96A46 364 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 FGGYQ96C11 551 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 RHOVQ96L33 236 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 MRPL13Q9BYD1 178 aaKnown RBP10.72□□□□□ -0.69
COL27A1-202ENST00000451716 GSX2Q9BZM3 304 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 CLEC4MQ9H2X3 399 aaPredicted RBP10.72□□□□□ -0.69
COL27A1-202ENST00000451716 KLHL13Q9P2N7 655 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 ING4Q9UNL4 249 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 POLR1DQ9Y2S0 133 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 TECTAO75443 2155 aa10.72□□□□□ -0.69
COL27A1-202ENST00000451716 ETV2O00321 342 aaPredicted RBP10.71□□□□□ -0.69
COL27A1-202ENST00000451716 MED6O75586 246 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 KLF7O75840 302 aaPredicted RBP10.71□□□□□ -0.69
COL27A1-202ENST00000451716 RAB3DO95716 219 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 BPNT1O95861 308 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 ONECUT2O95948 504 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 SULT1A3P0DMM9 295 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 SULT1A4P0DMN0 295 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 PCK2Q16822 640 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 DMRTC1Q5HYR2 192 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 SAPCD1Q5SSQ6 148 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 FAM166AQ6J272 317 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 LIN54Q6MZP7 749 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 DEFB123Q8N688 67 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 AGBL5Q8NDL9 886 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 OR4C16Q8NGL9 310 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 RNF133Q8WVZ7 376 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 C14orf144Q96I85 54 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 METTL17Q9H7H0 456 aaPredicted RBP10.71□□□□□ -0.69
COL27A1-202ENST00000451716 PISDQ9UG56 409 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 HS3ST3B1Q9Y662 390 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 TNRC6BQ9UPQ9 1833 aaKnown RBP10.71□□□□□ -0.69
COL27A1-202ENST00000451716 LAMA5O15230 3695 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 IGHV1-45A0A0A0MS14 117 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 IGHV3-15A0A0B4J1V0 119 aa10.71□□□□□ -0.69
COL27A1-202ENST00000451716 H7C417 338 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms