RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 OR5V1Q9UGF6 321 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 ETV7Q9Y603 341 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 PTPRQQ9UMZ3 2332 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 C5orf63A6NC05 138 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 SLC17A2O00624 439 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 HLA-HP01893 362 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 GABRA1P14867 456 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 ZNF20P17024 532 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 ARR3P36575 388 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 CLDN12P56749 244 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 P2RY14Q15391 338 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 ZNF324BQ6AW86 544 aaPredicted RBP12.44□□□□□ -0.42
USP39-207ENST00000450066 FAM166AQ6J272 317 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 Q6ZSR3 168 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 CPEB3Q8NE35 698 aaKnown RBP12.44□□□□□ -0.42
USP39-207ENST00000450066 OR51A2Q8NGJ7 313 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 OR1K1Q8NGR3 316 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 SOX7Q9BT81 388 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 ARHGAP21Q5T5U3 1957 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 COX5BP10606 129 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 IL7P13232 177 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 PTGER4P35408 488 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 KIR2DL2P43627 348 aaPredicted RBP12.43□□□□□ -0.42
USP39-207ENST00000450066 PITPNBP48739 271 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 HGFACQ04756 655 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 SPOCK1Q08629 439 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 BAK1Q16611 211 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 SNAI3Q3KNW1 292 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 DCDC5Q6ZRR9 648 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 PGAP1Q75T13 922 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 OR1M1Q8NGA1 313 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 OR6K3Q8NGY3 331 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 OR14K1Q8NGZ2 314 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 BCL2L2Q92843 193 aaPredicted RBP12.43□□□□□ -0.42
USP39-207ENST00000450066 FOXRED1Q96CU9 486 aaPredicted RBP12.43□□□□□ -0.42
USP39-207ENST00000450066 TMEM138Q9NPI0 162 aa12.43□□□□□ -0.42
USP39-207ENST00000450066 LOC390937A0A1W2PQ73 354 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 MBD3L4A6NDZ8 208 aaPredicted RBP12.42□□□□□ -0.42
USP39-207ENST00000450066 MBD3L3A6NE82 208 aaPredicted RBP12.42□□□□□ -0.42
USP39-207ENST00000450066 A6NIN4 97 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 MBD3L5A6NJ08 208 aaPredicted RBP12.42□□□□□ -0.42
USP39-207ENST00000450066 WDR1O75083 606 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 DHRS3O75911 302 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 UBL3O95164 117 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 BDKRB2P30411 391 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 MADCAM1Q13477 382 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 OXA1LQ15070 435 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 RAB11BQ15907 218 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 Q6ZNX1 250 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 Q6ZT83 130 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 LYPD6Q86Y78 171 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 CENPSQ8N2Z9 138 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 Q8N402 240 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 CNEP1R1Q8N9A8 125 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 MBD3L2Q8NHZ7 208 aaPredicted RBP12.42□□□□□ -0.42
USP39-207ENST00000450066 SGK3Q96BR1 496 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 ABCG5Q9H222 651 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 PLEKHA1Q9HB21 404 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 ZNF71Q9NQZ8 489 aaPredicted RBP12.42□□□□□ -0.42
USP39-207ENST00000450066 ZNF391Q9UJN7 358 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 V9GYS6 101 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 A0A0G2JMP0 313 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 A0A0X1KG70 313 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 ZNF503-AS2A6NEH8 195 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 MTRF1O75570 445 aaKnown RBP12.42□□□□□ -0.42
USP39-207ENST00000450066 LCATP04180 440 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 ERCC1P07992 297 aaPredicted RBP12.42□□□□□ -0.42
USP39-207ENST00000450066 CSF3P09919 207 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 CD79AP11912 226 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 ABOP16442 354 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 RAB3AP20336 220 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 NR4A2P43354 598 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 ID4P47928 161 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 DEFA1P59665 94 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 DEFA3P59666 94 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 RAB1AP62820 205 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 CXADRP78310 365 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 TGFBR3Q03167 851 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 TMEM53Q6P2H8 277 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 Q8NA96 180 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 MINDY2Q8NBR6 621 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 OR4M2Q8NGB6 313 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 C10orf35Q96D05 121 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 SLC25A38Q96DW6 304 aa12.42□□□□□ -0.42
USP39-207ENST00000450066 DHRS7CA6NNS2 312 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 HTR2CP28335 458 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 ART1P52961 327 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 SCN1BQ07699 218 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 TRIM16LQ309B1 348 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 HIKESHIQ53FT3 197 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 C1orf100Q5SVJ3 147 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 GLYATL3Q5SZD4 288 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 PYHIN1Q6K0P9 492 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 BAIAP2L2Q6UXY1 529 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 CMTM4Q8IZR5 234 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 OR6M1Q8NGM8 313 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 OR13C9Q8NGT0 318 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 RAB40AQ8WXH6 277 aa12.41□□□□□ -0.42
USP39-207ENST00000450066 NANOS1Q8WY41 292 aaKnown RBP12.41□□□□□ -0.42
USP39-207ENST00000450066 SLC25A28Q96A46 364 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms