RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 RPS2P15880 293 aaKnown RBP13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 PRSS12P56730 875 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 PAX8Q06710 450 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 FOXL1Q12952 345 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 BAMBIQ13145 260 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 SLC35F1Q5T1Q4 408 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 MOGAT3Q86VF5 341 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 LINC00346Q8IVM7 164 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 SDR9C7Q8NEX9 313 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 OR2T33Q8NG76 320 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 OR52E2Q8NGJ4 325 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 OR4K13Q8NH42 304 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 UTP4Q969X6 686 aaKnown RBP13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 DUS3LQ96G46 650 aaKnown RBP13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 PITX2Q99697 317 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 SLC30A2Q9BRI3 323 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 CDADC1Q9BWV3 514 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 TSSK6Q9BXA6 273 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 HCAR1Q9BXC0 346 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 MS4A7Q9GZW8 240 aaPredicted RBP13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 ZNF556Q9HAH1 456 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 TMEM100Q9NV29 134 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 MIOXQ9UGB7 285 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 BAIAP2Q9UQB8 552 aa13.89□□□□□ -0.19
RAB11FIP3-204ENST00000449879 DNAJC9-AS1A6NH13 148 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 LRRC30A6NM36 301 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 IQCF6A8MYZ5 107 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 F5H5K5 113 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 ANXA8P13928 327 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 SELEP16581 610 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 GNB2P62879 340 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 TUSC1Q2TAM9 212 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 FAM201AQ5SY85 155 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 BTNL3Q6UXE8 466 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 NAA40Q86UY6 237 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 KLBQ86Z14 1044 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 HS3ST5Q8IZT8 346 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 LNX2Q8N448 690 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 SLC26A10Q8NG04 563 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 TEX47Q8TBZ9 253 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 NRBF2Q96F24 287 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 ZNF48Q96MX3 618 aaPredicted RBP13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 TMEM246Q9BRR3 403 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 RPRD1BQ9NQG5 326 aaKnown RBP13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 AP4S1Q9Y587 144 aa13.88□□□□□ -0.19
RAB11FIP3-204ENST00000449879 H3BN98 237 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 HLA-DQA2P01906 255 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 IGHV4-38-2P0DP08 117 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 FCGR1AP12314 374 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 FASP25445 335 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 PMELP40967 661 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 ATP6AP1Q15904 470 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 SLC36A3Q495N2 470 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 SLC18B1Q6NT16 456 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 LRRN1Q6UXK5 716 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 CFAP77Q6ZQR2 320 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 COLCA1Q6ZS62 124 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 OR2AJ1Q8NGZ0 328 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 RAB40AQ8WXH6 277 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 NEIL1Q96FI4 390 aaPredicted RBP13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 PLEKHA8Q96JA3 519 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 C1orf147Q96MC9 270 aaPredicted RBP13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 ZNF747Q9BV97 191 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 KIF17Q9P2E2 1029 aa13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 SOX21Q9Y651 276 aaPredicted RBP13.87□□□□□ -0.19
RAB11FIP3-204ENST00000449879 OR6C68A6NDL8 312 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 LCATP04180 440 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 ACSM4P0C7M7 580 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 PRKACGP22612 351 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 CPT2P23786 658 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 PAX2Q02962 417 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 GK2Q14410 553 aaPredicted RBP13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 ZNF181Q2M3W8 571 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 ZBTB46Q86UZ6 589 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 C1orf87Q8N0U7 546 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 PARP8Q8N3A8 854 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 OR4Q3Q8NH05 313 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 OR5K1Q8NHB7 308 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 DNAJC9Q8WXX5 260 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 FN3KQ9H479 309 aa13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.86□□□□□ -0.19
RAB11FIP3-204ENST00000449879 IGHV2-70DA0A0C4DH43 119 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 TMPRSS2O15393 492 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 IFNGP01579 166 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 IRF2P14316 349 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 MTNR1AP48039 350 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 ACTR3P61158 418 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 ECH1Q13011 328 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 MALLQ13021 153 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 MAB21L1Q13394 359 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 KRTAP27-1Q3LI81 207 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 ZNF404Q494X3 552 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 SHISA2Q6UWI4 295 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 NLRC3Q7RTR2 1065 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 CYB561A3Q8NBI2 242 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 C19orf18Q8NEA5 215 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 OR8B3Q8NGG8 313 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 SLC25A28Q96A46 364 aa13.85□□□□□ -0.19
RAB11FIP3-204ENST00000449879 OR8B2Q96RD0 313 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms