RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 AGFG2O95081 481 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 CELA3BP08861 270 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 CDSNQ15517 529 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 SNAI3Q3KNW1 292 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 ACSM3Q53FZ2 586 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 PAMR1Q6UXH9 720 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 CCDC54Q8NEL0 328 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 ITLN2Q8WWU7 325 aaPredicted RBP16.69■□□□□ 0.26
RPS28-202ENST00000449223 ITFG2Q969R8 447 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 APOBEC3DQ96AK3 386 aaPredicted RBP16.69■□□□□ 0.26
RPS28-202ENST00000449223 C12orf43Q96C57 262 aaKnown RBP16.69■□□□□ 0.26
RPS28-202ENST00000449223 OR10A2Q9H208 303 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 KCNJ16Q9NPI9 418 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 IGHV1-18A0A0C4DH31 117 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 LOC390937A0A1W2PQ73 354 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 CCDC160A6NGH7 325 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 FAM90A27PA6NNH2 459 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 CECR9P0C854 216 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 ZNF35P13682 527 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 MAPK3P27361 379 aaPredicted RBP16.68■□□□□ 0.26
RPS28-202ENST00000449223 PCSK6P29122 969 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 WNT5AP41221 380 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 ZMAT1Q5H9K5 638 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 C22orf34Q6ZV56 151 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 RDH10Q8IZV5 341 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 PAQR4Q8N4S7 273 aaPredicted RBP16.68■□□□□ 0.26
RPS28-202ENST00000449223 OR13C5Q8NGS8 318 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 OR10AC1Q8NH08 325 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 SPSB4Q96A44 273 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 NPAP1Q9NZP6 1156 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 HCFC1P51610 2035 aa16.68■□□□□ 0.26
RPS28-202ENST00000449223 LOC100506127A0A0U1RQW1 187 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 ZNF879B4DU55 563 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 XRCC2O43543 280 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 RAF1P04049 648 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 LCATP04180 440 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 UCHL1P09936 223 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 CCL2P13500 99 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 INSL4Q14641 139 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 DOK3Q7L591 496 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 OR51A4Q8NGJ6 313 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 OR51E1Q8TCB6 317 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 OR14A2Q96R54 314 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 KCNS3Q9BQ31 491 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 SLC24A3Q9HC58 644 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 GSTK1Q9Y2Q3 226 aa16.67■□□□□ 0.26
RPS28-202ENST00000449223 UBR5O95071 2799 aaPredicted RBP16.67■□□□□ 0.26
RPS28-202ENST00000449223 TRBV5-7A0A0A0MS05 114 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 C5orf63A6NC05 138 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 NKX2-6A6NCS4 301 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 DHRS7CA6NNS2 312 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 P2RY10O00398 339 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 ZG16O60844 167 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 CLDN14O95500 239 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 THBDP07204 575 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 OCM2P0CE71 109 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 NR4A1P22736 598 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 VBP1P61758 197 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 NCS1P62166 190 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 ODF4Q2M2E3 257 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 LYZL4Q96KX0 146 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 KCTD7Q96MP8 289 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 DERL3Q96Q80 235 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 CDH20Q9HBT6 801 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 EXOSC4Q9NPD3 245 aaKnown RBP16.66■□□□□ 0.26
RPS28-202ENST00000449223 GPR84Q9NQS5 396 aa16.66■□□□□ 0.26
RPS28-202ENST00000449223 SYT7O43581 403 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 ARL6IP5O75915 188 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 ZNF12P17014 697 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 CCNOP22674 350 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 CFL1P23528 166 aaKnown RBP16.65■□□□□ 0.26
RPS28-202ENST00000449223 C22orf42Q6IC83 251 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 CEACAM19Q7Z692 300 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 C1orf174Q8IYL3 243 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 ZNF101Q8IZC7 436 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 SGK3Q96BR1 496 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 OPA3Q9H6K4 179 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 ANKHD1Q8IWZ3 2542 aaKnown RBP16.65■□□□□ 0.26
RPS28-202ENST00000449223 IGHV2OR16-5A0A0B4J2B6 119 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 A0A1B0GVI7 797 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 TBX1O43435 398 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 DHRS3O75911 302 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 EPXP11678 715 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 TUBG1P23258 451 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 LSM3P62310 102 aaKnown RBP16.65■□□□□ 0.26
RPS28-202ENST00000449223 NAAAQ02083 359 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 TMEM106AQ96A25 262 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 C10orf35Q96D05 121 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 C1QTNF6Q9BXI9 259 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 PPIL3Q9H2H8 161 aaKnown RBP16.65■□□□□ 0.26
RPS28-202ENST00000449223 RNF167Q9H6Y7 350 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 TUBG2Q9NRH3 451 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 ZNF275Q9NSD4 429 aaPredicted RBP16.65■□□□□ 0.26
RPS28-202ENST00000449223 V9GYS6 101 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 MYO18BQ8IUG5 2567 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 FLNCQ14315 2725 aa16.65■□□□□ 0.26
RPS28-202ENST00000449223 PIN1P1O15428 100 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 SMPD2O60906 423 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 ATE1O95260 518 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 CD2P06729 351 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms