RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 APOBEC3DQ96AK3 386 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-203ENST00000449049 YIPF6Q96EC8 236 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 PDCD1LG2Q9BQ51 273 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 KLF2Q9Y5W3 355 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-203ENST00000449049 FAM208BQ5VWN6 2430 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 DPRXA6NFQ7 191 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 GPRIN2O60269 458 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 SMPD2O60906 423 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 ISG15P05161 165 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 UBCP0CG48 685 aaKnown RBP12.14□□□□□ -0.47
SHMT2-203ENST00000449049 ZNF704Q6ZNC4 412 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-203ENST00000449049 GPR141Q7Z602 305 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 ZBTB8BQ8NAP8 495 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-203ENST00000449049 COMMD4Q9H0A8 199 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 OR10A2Q9H208 303 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 EIF3KQ9UBQ5 218 aaKnown RBP12.14□□□□□ -0.47
SHMT2-203ENST00000449049 RSL24D1Q9UHA3 163 aaKnown RBP12.14□□□□□ -0.47
SHMT2-203ENST00000449049 N6AMT1Q9Y5N5 214 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 TBX1O43435 398 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 NGFP01138 241 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 CRYAAP02489 173 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 CD36P16671 472 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 GABRA5P31644 462 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 TTKP33981 857 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 RFPL4BQ6ZWI9 263 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 ZNF676Q8N7Q3 588 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 ACBD4Q8NC06 268 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 RGP1Q92546 391 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-203ENST00000449049 FAIMQ9NVQ4 179 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 PAIP2BQ9ULR5 123 aaKnown RBP12.13□□□□□ -0.47
SHMT2-203ENST00000449049 ZNF281Q9Y2X9 895 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 NBASA2RRP1 2371 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 ZNF462Q96JM2 2506 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 XRCC2O43543 280 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 CCL1P22362 96 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 UCP2P55851 309 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 RPS11P62280 158 aaKnown RBP eCLIP12.13□□□□□ -0.47
SHMT2-203ENST00000449049 RPS25P62851 125 aaKnown RBP12.13□□□□□ -0.47
SHMT2-203ENST00000449049 BSPH1Q075Z2 132 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 CBX3Q13185 183 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 ODF4Q2M2E3 257 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 YIF1BQ5BJH7 314 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 GLYATL3Q5SZD4 288 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 NCMAPQ5T1S8 102 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 TMEM244Q5VVB8 128 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 Q6ZNX1 250 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 DMRTC2Q8IXT2 367 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-203ENST00000449049 MS4A15Q8N5U1 240 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 SPSB4Q96A44 273 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 RGCCQ9H4X1 137 aa12.13□□□□□ -0.47
SHMT2-203ENST00000449049 PCNX1Q96RV3 2341 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 A0A1B0GTI1 187 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 P2RY10O00398 339 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 ACHEP22303 614 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 PSMA1P25786 263 aaKnown RBP12.12□□□□□ -0.47
SHMT2-203ENST00000449049 KIR2DL3P43628 341 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 SPOCK1Q08629 439 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 TRAM1Q15629 374 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 UNQ6126/PRO20091Q6UXV3 157 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 Q6ZSR3 168 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 RDH10Q8IZV5 341 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 ABHD4Q8TB40 342 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 OR51E1Q8TCB6 317 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 SGK3Q96BR1 496 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 LYZL4Q96KX0 146 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 TMED9Q9BVK6 235 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 ESRP2Q9H6T0 727 aaKnown RBP12.12□□□□□ -0.47
SHMT2-203ENST00000449049 CRIM1Q9NZV1 1036 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 ZNF391Q9UJN7 358 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 STARD10Q9Y365 291 aa12.12□□□□□ -0.47
SHMT2-203ENST00000449049 LOC107986453A0A1B0GWG9 222 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 MAGEB3O15480 346 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 FAM157BP0CG42 384 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 RAD52P43351 418 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 CD200R1LQ6Q8B3 271 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 C1orf174Q8IYL3 243 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 PLPP7Q8NBV4 271 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 OR5L1Q8NGL2 311 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 OR2AE1Q8NHA4 323 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 REEP6Q96HR9 211 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 KCNS3Q9BQ31 491 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 FUNDC2Q9BWH2 189 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 BCL2L14Q9BZR8 327 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 POFUT1Q9H488 388 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 PLGRKTQ9HBL7 147 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 GPR84Q9NQS5 396 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-203ENST00000449049 ATP6V1G2-DDX39BF2Z307 99 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 ABCD4O14678 606 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 SC5DO75845 299 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 NR4A1P22736 598 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 TUBG1P23258 451 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 NKX6-1P78426 367 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-203ENST00000449049 MALLQ13021 153 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 BEX5Q5H9J7 111 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 OR13C5Q8NGS8 318 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 OR10AC1Q8NH08 325 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 FAM222BQ8WU58 562 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 AKAP1Q92667 903 aaKnown RBP eCLIP12.11□□□□□ -0.47
SHMT2-203ENST00000449049 TMEM203Q969S6 136 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms