RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 TBX1O43435 398 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 PPIHO43447 177 aaKnown RBP12.37□□□□□ -0.43
USP39-206ENST00000448971 LMX1BO60663 402 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 ANXA2P07355 339 aaKnown RBP12.37□□□□□ -0.43
USP39-206ENST00000448971 H2BFMP0C1H6 154 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 SELEP16581 610 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 COL8A2P25067 703 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 GIFP27352 417 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 CHN2P52757 468 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 MRPS11P82912 194 aaKnown RBP12.37□□□□□ -0.43
USP39-206ENST00000448971 RSPO1Q2MKA7 263 aaPredicted RBP12.37□□□□□ -0.43
USP39-206ENST00000448971 SNAI3Q3KNW1 292 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 COLCA1Q6ZS62 124 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 PGAP1Q75T13 922 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 NAA40Q86UY6 237 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 OTOSQ8NHW6 89 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 TMEM163Q8TC26 289 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 THEM6Q8WUY1 208 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 RNF133Q8WVZ7 376 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 ZNF582Q96NG8 517 aaPredicted RBP12.37□□□□□ -0.43
USP39-206ENST00000448971 IL4I1Q96RQ9 567 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 TOR3AQ9H497 397 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 NARFLQ9H6Q4 476 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 H2AFY2Q9P0M6 372 aaPredicted RBP12.37□□□□□ -0.43
USP39-206ENST00000448971 LAMP5Q9UJQ1 280 aa12.37□□□□□ -0.43
USP39-206ENST00000448971 LRP5LA4QPB2 252 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 CCDC182A6NF36 153 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 SLC22A31A6NKX4 558 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 IQCF6A8MYZ5 107 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 CLDN25C9JDP6 229 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 OTX1P32242 354 aaPredicted RBP12.36□□□□□ -0.43
USP39-206ENST00000448971 RAD23AP54725 363 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 RIN1Q13671 783 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 GK2Q14410 553 aaPredicted RBP12.36□□□□□ -0.43
USP39-206ENST00000448971 TRIP10Q15642 601 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 HFEQ30201 348 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 BCDIN3DQ7Z5W3 292 aaKnown RBP12.36□□□□□ -0.43
USP39-206ENST00000448971 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.36□□□□□ -0.43
USP39-206ENST00000448971 GID4Q8IVV7 300 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 PQLC1Q8N2U9 271 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 OR10AD1Q8NGE0 317 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 OR2AE1Q8NHA4 323 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 AMELYQ99218 206 aa12.36□□□□□ -0.43
USP39-206ENST00000448971 CNN2Q99439 309 aaKnown RBP12.36□□□□□ -0.43
USP39-206ENST00000448971 XRCC2O43543 280 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 RP2O75695 350 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 APOC1P02654 83 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 ALPLP05186 524 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 CD55P08174 381 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 ADH4P08319 380 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 TNFRSF1AP19438 455 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 POLR2IP36954 125 aaKnown RBP12.35□□□□□ -0.43
USP39-206ENST00000448971 OPRL1P41146 370 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 CRYBB2P43320 205 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 GZMKP49863 264 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 ALDH3A2P51648 485 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 CDC42P60953 191 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 GFOD2Q3B7J2 385 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 LINC01559Q495D7 138 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 GLYATL3Q5SZD4 288 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 AVPI1Q5T686 147 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 NXNL2Q5VZ03 156 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 Q6ZR03 302 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 SLC16A9Q7RTY1 509 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 CBR4Q8N4T8 237 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 OR8G5Q8NG78 346 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 FAM81AQ8TBF8 368 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 SPRYD4Q8WW59 207 aaPredicted RBP12.35□□□□□ -0.43
USP39-206ENST00000448971 CCL17Q92583 94 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 TIMD4Q96H15 378 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 C9orf16Q9BUW7 83 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 TTTY10Q9BZA0 68 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 SP140LQ9H930 580 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 BRD7Q9NPI1 651 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 IMPAD1Q9NX62 359 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 USE1Q9NZ43 259 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 TREM2Q9NZC2 230 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 KLHDC2Q9Y2U9 406 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 CACNG2Q9Y698 323 aa12.35□□□□□ -0.43
USP39-206ENST00000448971 TENM1Q9UKZ4 2725 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 GGT3PA6NGU5 568 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 BAG2O95816 211 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 TACSTD2P09758 323 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 SRD5A1P18405 259 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 ANOS1P23352 680 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 TMEM33P57088 247 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 ZNF121P58317 390 aaPredicted RBP12.34□□□□□ -0.43
USP39-206ENST00000448971 ZNF92Q03936 586 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 CDK5R2Q13319 367 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 TIGD6Q17RP2 521 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 FAM120AOSQ5T036 256 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 LRRN1Q6UXK5 716 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 FAM57BQ71RH2 274 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 MEPCEQ7L2J0 689 aaKnown RBP12.34□□□□□ -0.43
USP39-206ENST00000448971 KRT77Q7Z794 578 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 OR13G1Q8NGZ3 307 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 ITLN1Q8WWA0 313 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 EME1Q96AY2 570 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 OR2V2Q96R30 315 aa12.34□□□□□ -0.43
USP39-206ENST00000448971 TEAD3Q99594 435 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms