RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 WNT5BQ9H1J7 359 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 OCEL1Q9H607 264 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 RNF121Q9H920 327 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 CCNB1IP1Q9NPC3 277 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 PLCXD1Q9NUJ7 323 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 FKBP14Q9NWM8 211 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 ERVK-18Q9QC07 812 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 CYB5R1Q9UHQ9 305 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 DUSP13Q9UII6 198 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 EXOGQ9Y2C4 368 aaKnown RBP11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 LRCH1Q9Y2L9 728 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 DYSFO75923 2080 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 A0A1W2PQL4 384 aaPredicted RBP11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 SNTNA6NMZ2 147 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 J3QRE1 110 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 ALDH3B1P43353 468 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 AQP6Q13520 282 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 RAB39AQ14964 217 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 MOGQ16653 247 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 SLC36A2Q495M3 483 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 NRN1LQ496H8 165 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 PABPC1L2AQ5JQF8 200 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 TEX30Q5JUR7 227 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 CPEB3Q8NE35 698 aaKnown RBP11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 OR2AJ1Q8NGZ0 328 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 CLDND2Q8NHS1 167 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 OTOSQ8NHW6 89 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 ST7LQ8TDW4 575 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 SLC7A6Q92536 515 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 YIPF3Q9GZM5 350 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 C1orf198Q9H425 327 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 PNRC2Q9NPJ4 139 aaKnown RBP11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 MRPS18AQ9NVS2 196 aaKnown RBP11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 HIF1ANQ9NWT6 349 aa11.72□□□□□ -0.53
PDLIM2-213ENST00000448520 PPIHO43447 177 aaKnown RBP11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 DOK2O60496 412 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 MSMBP08118 114 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 HTR1AP08908 422 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 CCL2P13500 99 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 ALOX5APP20292 161 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 C21orf33P30042 268 aaPredicted RBP11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 RAD52P43351 418 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 ETV1P50549 477 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 CXCR4P61073 352 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 HIST1H3AP68431 136 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 SLC35A2P78381 396 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 ST3GAL4Q11206 333 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 POU4F2Q12837 409 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 DOC2BQ14184 412 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 HIST2H3PS2Q5TEC6 136 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 RGS7BPQ6MZT1 257 aaPredicted RBP11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 TMEM53Q6P2H8 277 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 LRRN1Q6UXK5 716 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 C12orf54Q6X4T0 127 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 HIST2H3AQ71DI3 136 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 VASH1Q7L8A9 365 aaPredicted RBP11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 LHFPL3Q86UP9 236 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 LRP11Q86VZ4 500 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 ZNF584Q8IVC4 421 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 OR1J2Q8NGS2 313 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 OR51F2Q8NH61 342 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 COPS4Q9BT78 406 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 KCNN2Q9H2S1 579 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 METTL17Q9H7H0 456 aaPredicted RBP11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 FGF20Q9NP95 211 aaPredicted RBP11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 ZNF275Q9NSD4 429 aaPredicted RBP11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 CENPMQ9NSP4 180 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 SCN3BQ9NY72 215 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 SLCO1C1Q9NYB5 712 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 NKIRAS2Q9NYR9 191 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 CLEC2DQ9UHP7 191 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 LAMP5Q9UJQ1 280 aa11.71□□□□□ -0.53
PDLIM2-213ENST00000448520 TRAV20A0A0B4J274 112 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 A0A1W2PPW3 197 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 EFCAB10A6NFE3 127 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 ZNF670-ZNF695F2Z2N8 137 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 SGCEO43556 437 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 IGHA1P01876 353 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 MT-ND2P03891 347 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 CDK1P06493 297 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 DBHP09172 617 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 CCDC159P0C7I6 412 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 NAT2P11245 290 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 ZNF250P15622 560 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 ANOS1P23352 680 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 SCRN3Q0VDG4 424 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 RAB40BQ12829 278 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 NKPD1Q17RQ9 610 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 PCGF3Q3KNV8 242 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 KLHL22Q53GT1 634 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 RBM48Q5RL73 367 aaKnown RBP11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 PLEKHG7Q6ZR37 379 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 STX19Q8N4C7 294 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 SLC30A7Q8NEW0 376 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 SYNPRQ8TBG9 265 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 ZNF418Q8TF45 676 aaPredicted RBP11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 YIPF5Q969M3 257 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 SLAMF6Q96DU3 332 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 ZNF649Q9BS31 505 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 BCL2L14Q9BZR8 327 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms