RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 MARCH7Q9H992 704 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 PAPOLBQ9NRJ5 636 aaKnown RBP12.44□□□□□ -0.42
USE1-202ENST00000445667 TVP23BQ9NYZ1 205 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 AP4S1Q9Y587 144 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.44□□□□□ -0.428e-8■■■□□ 16.9
USE1-202ENST00000445667 DYSFO75923 2080 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 TANC2Q9HCD6 1990 aa12.43□□□□□ -0.42
USE1-202ENST00000445667 CD300LBA8K4G0 201 aa12.43□□□□□ -0.42
USE1-202ENST00000445667 TMEM178BH3BS89 294 aa12.43□□□□□ -0.42
USE1-202ENST00000445667 SELENOFO60613 162 aa12.43□□□□□ -0.42
USE1-202ENST00000445667 MITFO75030 526 aaPredicted RBP12.43□□□□□ -0.42
USE1-202ENST00000445667 ZNF205O95201 554 aa12.43□□□□□ -0.42
USE1-202ENST00000445667 PCMT1P22061 227 aa12.43□□□□□ -0.42
USE1-202ENST00000445667 SRP14P37108 136 aaKnown RBP12.43□□□□□ -0.42
USE1-202ENST00000445667 SRP9P49458 86 aaKnown RBP12.43□□□□□ -0.42
USE1-202ENST00000445667 ATP6AP1Q15904 470 aa12.43□□□□□ -0.42
USE1-202ENST00000445667 SNAPC1Q16533 368 aa12.43□□□□□ -0.42
USE1-202ENST00000445667 SHFQ7M4L6 423 aa12.43□□□□□ -0.42
USE1-202ENST00000445667 MOGAT3Q86VF5 341 aa12.43□□□□□ -0.42
USE1-202ENST00000445667 REPIN1Q9BWE0 567 aaKnown RBP12.43□□□□□ -0.42
USE1-202ENST00000445667 SLC25A19Q9HC21 320 aa12.43□□□□□ -0.42
USE1-202ENST00000445667 TRAV20A0A0B4J274 112 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 A0A1B0GWJ7 208 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 GGT3PA6NGU5 568 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 TBX1O43435 398 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 CYB5R3P00387 301 aaPredicted RBP12.42□□□□□ -0.42
USE1-202ENST00000445667 ANXA2P07355 339 aaKnown RBP12.42□□□□□ -0.42
USE1-202ENST00000445667 CA6P23280 308 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 FASP25445 335 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 HSD11B1P28845 292 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 PMELP40967 661 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 NAA10P41227 235 aaPredicted RBP12.42□□□□□ -0.42
USE1-202ENST00000445667 SLC15A1P46059 708 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 CX3CR1P49238 355 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 MMP16P51512 607 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 RPS7P62081 194 aaKnown RBP12.42□□□□□ -0.42
USE1-202ENST00000445667 BTG1P62324 171 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 GRB2P62993 217 aaKnown RBP12.42□□□□□ -0.42
USE1-202ENST00000445667 SRSF2Q01130 221 aaKnown RBP12.42□□□□□ -0.42
USE1-202ENST00000445667 MAB21L1Q13394 359 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 PTGES3Q15185 160 aaKnown RBP12.42□□□□□ -0.42
USE1-202ENST00000445667 ZMYND11Q15326 602 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 CXXC5Q7LFL8 322 aaKnown RBP12.42□□□□□ -0.42
USE1-202ENST00000445667 LRRC28Q86X40 367 aaPredicted RBP12.42□□□□□ -0.42
USE1-202ENST00000445667 THEM6Q8WUY1 208 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 RNF133Q8WVZ7 376 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 DNAJC9Q8WXX5 260 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 LRTOMTQ8WZ04 291 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 TEX12Q9BXU0 123 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 G6PC2Q9NQR9 355 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 DNAJC27Q9NZQ0 273 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 PCDHB10Q9UN67 800 aa12.42□□□□□ -0.42
USE1-202ENST00000445667 RNF212BA8MTL3 300 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 G3V2T6 193 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 PHF1O43189 567 aaPredicted RBP12.41□□□□□ -0.42
USE1-202ENST00000445667 PRODHO43272 600 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 AVPP01185 164 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 SLC2A5P22732 501 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 HCCSP53701 268 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 LCN2P80188 198 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 APOFQ13790 326 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 OR8G1Q15617 311 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 FAM201AQ5SY85 155 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 KLHL36Q8N4N3 616 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 OTOSQ8NHW6 89 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 DVL3Q92997 716 aaPredicted RBP12.41□□□□□ -0.42
USE1-202ENST00000445667 DUS3LQ96G46 650 aaKnown RBP12.41□□□□□ -0.42
USE1-202ENST00000445667 TOR3AQ9H497 397 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 BRD7Q9NPI1 651 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 KRT84Q9NSB2 600 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 UFSP2Q9NUQ7 469 aa12.41□□□□□ -0.42
USE1-202ENST00000445667 M0R129 80 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 CIB2O75838 187 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 PNPP00491 289 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 LYNP07948 512 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 H2BFMP0C1H6 154 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 ZFP36P26651 326 aaKnown RBP12.4□□□□□ -0.42
USE1-202ENST00000445667 EPHA2P29317 976 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 OPRL1P41146 370 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 CD200P41217 278 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 RAD23AP54725 363 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 ZNF121P58317 390 aaPredicted RBP12.4□□□□□ -0.42
USE1-202ENST00000445667 SEC61A1P61619 476 aaKnown RBP12.4□□□□□ -0.42
USE1-202ENST00000445667 ESRRGP62508 458 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 MPPED2Q15777 294 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 TMEM155Q4W5P6 130 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 SLC35D3Q5M8T2 416 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 PRAMEF6Q5VXH4 476 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 C1orf229Q6ZS94 237 aaPredicted RBP12.4□□□□□ -0.42
USE1-202ENST00000445667 FAM57BQ71RH2 274 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 ASRGL1Q7L266 308 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 PRSS45Q7RTY3 260 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 BCDIN3DQ7Z5W3 292 aaKnown RBP12.4□□□□□ -0.42
USE1-202ENST00000445667 PARP8Q8N3A8 854 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 SPICQ8N5J4 248 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 OR56B2PQ8NGI1 322 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 SGK3Q96BR1 496 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 TEAD3Q99594 435 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 SEMA6AQ9H2E6 1030 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 PATZ1Q9HBE1 687 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms