RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 BARX1Q9HBU1 254 aaPredicted RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 BET1LQ9NYM9 111 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 TAS2R13Q9NYV9 303 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 LPAR3Q9UBY5 353 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 CACFD1Q9UGQ2 172 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ADAM29Q9UKF5 820 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 TSPAN16Q9UKR8 245 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 CAMK2AQ9UQM7 478 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 AMDHD2Q9Y303 409 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ATG4BQ9Y4P1 393 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 CCL27Q9Y4X3 112 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ANKRD17O75179 2603 aaKnown RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 LOXHD1Q8IVV2 1947 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 IGKV6D-41A0A0C4DH26 115 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 A0A0U1RQK1 487 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 IFITM10A6NMD0 228 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 LRRC37AA6NMS7 1700 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 E5RGE8 158 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 DVL2O14641 736 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 LDB2O43679 373 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 NME2P1O60361 137 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 GLCEO94923 617 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 TK1P04183 234 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 IFNW1P05000 195 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ATP1B1P05026 303 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 NR2F1P10589 423 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 HSD3B1P14060 373 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 GZMHP20718 246 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 FPR2P25090 351 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 MPZP25189 248 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 LMO2P25791 158 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 CD1BP29016 333 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 FGF9P31371 208 aaPredicted RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 GABRA2P47869 451 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 NOVP48745 357 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 MTNR1BP49286 362 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 CCL11P51671 97 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 EFNA3P52797 238 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 RPS13P62277 151 aaKnown RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 HIST1H3AP68431 136 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ADAM8P78325 824 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 SLC7A9P82251 487 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 HMGCS1Q01581 520 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 CHIT1Q13231 466 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 TPBGQ13641 420 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 INSL4Q14641 139 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 GNMTQ14749 295 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 PDGFRLQ15198 375 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 SLC36A2Q495M3 483 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 CRB2Q5IJ48 1285 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ZNF343Q6P1L6 599 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 TNFAIP8L2Q6P589 184 aaPredicted RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 TEX38Q6PEX7 206 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 HEPN1Q6WQI6 88 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 Q6ZN92 141 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ZNF765Q7L2R6 523 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 PLPPR4Q7Z2D5 763 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ADCK2Q7Z695 626 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 PIM3Q86V86 326 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 SYT12Q8IV01 421 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ZNF440Q8IYI8 595 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 MUC20Q8N307 709 aaPredicted RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 KRTCAP2Q8N6L1 136 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 IQCF1Q8N6M8 205 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 LRRC52Q8N7C0 313 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 FAM169BQ8N8A8 192 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 OR56A1Q8NGH5 318 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 OR52I1Q8NGK6 324 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 OR13D1Q8NGV5 346 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 SFXN5Q8TD22 340 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ASB17Q8WXJ9 295 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 HAS2Q92819 552 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 APH1AQ96BI3 265 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 LIN37Q96GY3 246 aaPredicted RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 LCORQ96JN0 433 aaPredicted RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 SLC41A2Q96JW4 573 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 MS4A10Q96PG2 267 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 NIPSNAP3BQ9BS92 247 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 TIMM29Q9BSF4 260 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 FNDC11Q9BVV2 318 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ACTR3CQ9C0K3 210 aaPredicted RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 SPHK2Q9NRA0 654 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 DLL3Q9NYJ7 618 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 GALPQ9UBC7 116 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 NDOR1Q9UHB4 597 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 SIX4Q9UIU6 781 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 SH2B3Q9UQQ2 575 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ITPR2Q14571 2701 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ZNF727A8MUV8 499 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 MAGEB17A8MXT2 336 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 K7EP13 123 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 IRAK2O43187 625 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 TNFSF12O43508 249 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 LRP3O75074 770 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 NME6O75414 186 aaPredicted RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 TRBC1P01850 177 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 HLA-AP01891 365 aaKnown RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 SFTPBP07988 381 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 IL3P08700 152 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 SLC35G6P0C7Q6 338 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms