RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ANKRD34CP0C6C1 535 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 CCL3P10147 92 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 ID4P47928 161 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 NUBP1P53384 320 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 FOXK1P85037 733 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 RIN1Q13671 783 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 GK2Q14410 553 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 MESTQ5EB52 335 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 GLRX5Q86SX6 157 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 NKAIN3Q8N8D7 197 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR11H4Q8NGC9 324 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 ANGPTL6Q8NI99 470 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZFP64Q9NPA5 681 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 LRP12Q9Y561 859 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 NBASA2RRP1 2371 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 MPZL1O95297 269 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 EIF4EP06730 217 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF85Q03923 595 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 HNF4GQ14541 408 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 CREB3L2Q70SY1 520 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZADH2Q8N4Q0 377 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR56B4Q8NH76 319 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR2V1Q8NHB1 315 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 PIGTQ969N2 578 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 ADIPOR1Q96A54 375 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR2M2Q96R28 347 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 MARVELD1Q9BSK0 173 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 TMEM231Q9H6L2 316 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 GPR84Q9NQS5 396 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 HSPB2A8KAH6 182 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 M0R135 149 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 CELA2AP08217 269 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 CXCL3P19876 107 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 IL32P24001 234 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 HSPB2Q16082 182 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 ISXQ2M1V0 245 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 DUSP18Q8NEJ0 188 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 NOXO1Q8NFA2 376 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR5T1Q8NG75 326 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR52I2Q8NH67 350 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 M1APQ8TC57 530 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF799Q96GE5 643 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 ATPIF1Q9UII2 106 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 ANKRD30BLA7E2S9 258 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 FGF5P12034 268 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 ALOX5APP20292 161 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 ATP1B3P54709 279 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 DLX5P56178 289 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 TAS2R19P59542 299 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 DYRK1AQ13627 763 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR52B4Q8NGK2 314 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 KCNG3Q8TAE7 436 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 ST8SIA4Q92187 359 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 TOMM40LQ969M1 308 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 MS4A3Q96HJ5 214 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 FAM173AQ9BQD7 235 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 JAM3Q9BX67 310 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 KCNIP3Q9Y2W7 256 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 THADAQ6YHU6 1953 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 IGKV3-11P04433 115 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 HOXB5P09067 269 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 RAB6AP20340 208 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 SNRPNP63162 240 aaKnown RBP10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 DEFB109BQ30KR1 87 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 WDR38Q5JTN6 314 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 BPIFB2Q8N4F0 458 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 LRFN3Q9BTN0 628 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 PTDSS2Q9BVG9 487 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 RPS10P5Q9NQ39 176 aa10.35□□□□□ -0.75
TRAPPC9-202ENST00000438773 DOPEY2Q9Y3R5 2298 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 TRAV1-2A0A0B4J238 106 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 A0A0B4J2A0 478 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 GUSBP08236 651 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 B4GALT1P15291 398 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 NAT1P18440 290 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 RAC1P63000 192 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 SLC9A3R2Q15599 337 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 CDONQ4KMG0 1287 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF585AQ6P3V2 769 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 TMEM91Q6ZNR0 172 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 PGAP1Q75T13 922 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 RHOUQ7L0Q8 258 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 CMTM4Q8IZR5 234 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 SLC38A9Q8NBW4 561 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR11H7Q8NGC8 314 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 C4orf45Q96LM5 186 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 TGIF2Q9GZN2 237 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 KLK11Q9UBX7 282 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 SHPKQ9UHJ6 478 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 B4E171 279 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 TPOP07202 933 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 NGFRP08138 427 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 SNRNP70P08621 437 aaKnown RBP10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 CALCBP10092 127 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 ATF1P18846 271 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 PTBP1P26599 531 aaKnown RBP eCLIP10.34□□□□□ -0.752e-7■■■■■ 27.6
TRAPPC9-202ENST00000438773 TSPAN7P41732 249 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 RAD52P43351 418 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZBTB37Q5TC79 503 aa10.34□□□□□ -0.75
TRAPPC9-202ENST00000438773 RNLSQ5VYX0 342 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms