RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ISPDA4D126 451 aa20.91■□□□□ 0.94
RAPGEF1-206ENST00000438647 EBAG9O00559 213 aa20.91■□□□□ 0.94
RAPGEF1-206ENST00000438647 LYNP07948 512 aa20.91■□□□□ 0.94
RAPGEF1-206ENST00000438647 KDM4DQ6B0I6 523 aa20.91■□□□□ 0.94
RAPGEF1-206ENST00000438647 OR51F2Q8NH61 342 aa20.91■□□□□ 0.94
RAPGEF1-206ENST00000438647 OTOSQ8NHW6 89 aa20.91■□□□□ 0.94
RAPGEF1-206ENST00000438647 CENPNQ96H22 339 aaPredicted RBP20.91■□□□□ 0.94
RAPGEF1-206ENST00000438647 GAL3ST1Q99999 423 aa20.91■□□□□ 0.94
RAPGEF1-206ENST00000438647 NPTNQ9Y639 398 aa20.91■□□□□ 0.94
RAPGEF1-206ENST00000438647 TANC2Q9HCD6 1990 aa20.9■□□□□ 0.94
RAPGEF1-206ENST00000438647 A0A1B0GWJ7 208 aa20.9■□□□□ 0.94
RAPGEF1-206ENST00000438647 XRCC2O43543 280 aa20.9■□□□□ 0.94
RAPGEF1-206ENST00000438647 MSMBP08118 114 aa20.9■□□□□ 0.94
RAPGEF1-206ENST00000438647 CX3CR1P49238 355 aa20.9■□□□□ 0.94
RAPGEF1-206ENST00000438647 RAD23AP54725 363 aa20.9■□□□□ 0.94
RAPGEF1-206ENST00000438647 ZNF92Q03936 586 aa20.9■□□□□ 0.94
RAPGEF1-206ENST00000438647 CR1LQ2VPA4 569 aa20.9■□□□□ 0.94
RAPGEF1-206ENST00000438647 MEGF10Q96KG7 1140 aa20.9■□□□□ 0.94
RAPGEF1-206ENST00000438647 REPIN1Q9BWE0 567 aaKnown RBP20.9■□□□□ 0.94
RAPGEF1-206ENST00000438647 GGT3PA6NGU5 568 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 CD300LBA8K4G0 201 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 FAM157AC9JC47 383 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 MLNRO43193 412 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 SELENOFO60613 162 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 H2BFMP0C1H6 154 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 SLC2A1P11166 492 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 ACTR3P61158 418 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 APOFQ13790 326 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 GLYATL3Q5SZD4 288 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 LCN1P1Q5VSP4 162 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 BBS1Q8NFJ9 593 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 OR2AE1Q8NHA4 323 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 TMEM186Q96B77 213 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 GCM1Q9NP62 436 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 TMEFF2Q9UIK5 374 aaPredicted RBP20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 N6AMT1Q9Y5N5 214 aa20.89■□□□□ 0.93
RAPGEF1-206ENST00000438647 IGHV2-5P01817 119 aa20.88■□□□□ 0.93
RAPGEF1-206ENST00000438647 ANXA2P07355 339 aaKnown RBP20.88■□□□□ 0.93
RAPGEF1-206ENST00000438647 SRD5A1P18405 259 aa20.88■□□□□ 0.93
RAPGEF1-206ENST00000438647 SLC2A5P22732 501 aa20.88■□□□□ 0.93
RAPGEF1-206ENST00000438647 OPRL1P41146 370 aa20.88■□□□□ 0.93
RAPGEF1-206ENST00000438647 NAA10P41227 235 aaPredicted RBP20.88■□□□□ 0.93
RAPGEF1-206ENST00000438647 PRSS12P56730 875 aa20.88■□□□□ 0.93
RAPGEF1-206ENST00000438647 C10orf67Q8IYJ2 551 aa20.88■□□□□ 0.93
RAPGEF1-206ENST00000438647 OR52H1Q8NGJ2 320 aa20.88■□□□□ 0.93
RAPGEF1-206ENST00000438647 THEM6Q8WUY1 208 aa20.88■□□□□ 0.93
RAPGEF1-206ENST00000438647 OSBPL10Q9BXB5 764 aa20.88■□□□□ 0.93
RAPGEF1-206ENST00000438647 SEMA6AQ9H2E6 1030 aa20.88■□□□□ 0.93
RAPGEF1-206ENST00000438647 DYSFO75923 2080 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 TRAV20A0A0B4J274 112 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 F5H5P2 479 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 H0YL77 283 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 TBX1O43435 398 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 MITFO75030 526 aaPredicted RBP20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 MMP16P51512 607 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 TIGD6Q17RP2 521 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 SLX4IPQ5VYV7 408 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 SPICQ8N5J4 248 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 CELF2-AS1Q8N7Q2 184 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 PYDC1Q8WXC3 89 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 LPAR2Q9HBW0 351 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 HIF1ANQ9NWT6 349 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 MRPL15Q9P015 296 aaKnown RBP20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 LAMP5Q9UJQ1 280 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 OAZ3Q9UMX2 235 aa20.87■□□□□ 0.93
RAPGEF1-206ENST00000438647 LRRC30A6NM36 301 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 ZAR1LA6NP61 321 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 IGHV2-70P01814 119 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 HLA-DPB1P04440 258 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 CFL1P23528 166 aaKnown RBP20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 DDOSTP39656 456 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 BTG1P62324 171 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 ZFP1Q6P2D0 407 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 SLC16A9Q7RTY1 509 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 ERGIC1Q969X5 290 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 SPSB4Q96A44 273 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 AMELYQ99218 206 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 TEAD3Q99594 435 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 YIPF3Q9GZM5 350 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 NIPAL2Q9H841 368 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 DCAF16Q9NXF7 216 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 UBAP1Q9NZ09 502 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 DNAJC27Q9NZQ0 273 aa20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 H2AFY2Q9P0M6 372 aaPredicted RBP20.86■□□□□ 0.93
RAPGEF1-206ENST00000438647 KIAA1324LA8MWY0 1029 aaPredicted RBP20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 TMEM178BH3BS89 294 aa20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 PRKYO43930 277 aa20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 GMDSO60547 372 aa20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 SBK2P0C263 348 aa20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 GATA4P43694 442 aa20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 ZNF121P58317 390 aaPredicted RBP20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 KPNB1Q14974 876 aaKnown RBP20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 OR8G1Q15617 311 aa20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 ZNF181Q2M3W8 571 aa20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 TMEM155Q4W5P6 130 aa20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 C1orf87Q8N0U7 546 aa20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 KLHL36Q8N4N3 616 aa20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 SIGLEC11Q96RL6 698 aa20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 CIB1Q99828 191 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms