RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 MEP1BQ16820 701 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 ZNF181Q2M3W8 571 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 ZNF404Q494X3 552 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 CCDC92Q53HC0 331 aaPredicted RBP6.49□□□□□ -1.37
VPS50-204ENST00000438395 CD276Q5ZPR3 534 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 HACD2Q6Y1H2 254 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 C9orf139Q6ZV77 190 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 PGAP1Q75T13 922 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 LINC00346Q8IVM7 164 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 CELF2-AS1Q8N7Q2 184 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 BOLLQ8N9W6 283 aaKnown RBP6.49□□□□□ -1.37
VPS50-204ENST00000438395 PROKR2Q8NFJ6 384 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 SLC26A10Q8NG04 563 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 OR52L1Q8NGH7 329 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 OR4F5Q8NH21 305 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 OR52J3Q8NH60 311 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 ERGIC1Q969X5 290 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 UPRTQ96BW1 309 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 TSSK2Q96PF2 358 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 TMEM246Q9BRR3 403 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 PCGF1Q9BSM1 259 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 ADAT1Q9BUB4 502 aaKnown RBP6.49□□□□□ -1.37
VPS50-204ENST00000438395 SLC22A4Q9H015 551 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 TMEM165Q9HC07 324 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 TRIM36Q9NQ86 728 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 RPRD1BQ9NQG5 326 aaKnown RBP6.49□□□□□ -1.37
VPS50-204ENST00000438395 TNFRSF19Q9NS68 423 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 UFSP2Q9NUQ7 469 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 NDUFAF4Q9P032 175 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 KCNG2Q9UJ96 466 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 TMCC3Q9ULS5 477 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 LHFPL6Q9Y693 200 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 DYSFO75923 2080 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 IGLV1-36A0A0B4J1U3 117 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 KIR2DS1A0A191URI9 304 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 hCG_1807616A0A1W2PRN6 198 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 H0YL77 283 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 M0R135 149 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 IMPA2O14732 288 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 HOXA3O43365 443 aaPredicted RBP6.48□□□□□ -1.37
VPS50-204ENST00000438395 OR10H3O60404 316 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 FAM20BO75063 409 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 PTP4A3O75365 173 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 DIRAS1O95057 198 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 GADD45GO95257 159 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 FSTL3O95633 263 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 TXNDC12O95881 172 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 HLA-DPB1P04440 258 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 H2AFXP16104 143 aaPredicted RBP6.48□□□□□ -1.37
VPS50-204ENST00000438395 FUT4P22083 530 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 GSTT1P30711 240 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 RBMXP38159 391 aaKnown RBP6.48□□□□□ -1.37
VPS50-204ENST00000438395 MDH1P40925 334 aaKnown RBP6.48□□□□□ -1.37
VPS50-204ENST00000438395 CDKN2AP42771 156 aaKnown RBP6.48□□□□□ -1.37
VPS50-204ENST00000438395 OMPP47874 163 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 NPY4RP50391 375 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 BPIFB3P59826 476 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 PSME3P61289 254 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 GK2Q14410 553 aaPredicted RBP6.48□□□□□ -1.37
VPS50-204ENST00000438395 TAF13Q15543 124 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 FAM201AQ5SY85 155 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 ZNF362Q5T0B9 420 aaPredicted RBP6.48□□□□□ -1.37
VPS50-204ENST00000438395 METTL11BQ5VVY1 283 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 WDR25Q64LD2 544 aaPredicted RBP6.48□□□□□ -1.37
VPS50-204ENST00000438395 CGB2Q6NT52 195 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 C16orf87Q6PH81 154 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 BRD3OSQ6XYD6 125 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 CFAP77Q6ZQR2 320 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 PTCHD4Q6ZW05 846 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 OR10S1Q8NGN2 331 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 OR4K13Q8NH42 304 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 SLCO4A1Q96BD0 722 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 TMIGD2Q96BF3 282 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 ZNF799Q96GE5 643 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 ZNF48Q96MX3 618 aaPredicted RBP6.48□□□□□ -1.37
VPS50-204ENST00000438395 NMNAT3Q96T66 252 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 COPS4Q9BT78 406 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 OR52D1Q9H346 318 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 BEX1Q9HBH7 125 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 NOX4Q9NPH5 578 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 ERVK-18Q9QC07 812 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 RNF7Q9UBF6 113 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 MAGEL2Q9UJ55 1249 aa6.48□□□□□ -1.37
VPS50-204ENST00000438395 TRAV38-1A0A0B4J264 116 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 BTBD17A6NE02 478 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 CD300LBA8K4G0 201 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 LGALS8O00214 317 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 ARPC3O15145 178 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 MLNRO43193 412 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 ADAM20O43506 726 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 NDUFA2O43678 99 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 IDH3BO43837 385 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 PLATP00750 562 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 LIPFP07098 398 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 ACSM4P0C7M7 580 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 HIST1H1CP16403 213 aaKnown RBP6.47□□□□□ -1.37
VPS50-204ENST00000438395 MDKP21741 143 aaPredicted RBP6.47□□□□□ -1.37
VPS50-204ENST00000438395 CA6P23280 308 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 OMGP23515 440 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 RAG2P55895 527 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms