RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PCBD1P61457 104 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 S100A12P80511 92 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 RPL19P84098 196 aaKnown RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 FUT7Q11130 342 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 SHHQ15465 462 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 C1QL3Q5VWW1 255 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 TMEM71Q6P5X7 295 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 MKXQ8IYA7 352 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 LGI3Q8N145 548 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 CRIPAKQ8N1N5 446 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 BPIFCQ8NFQ6 507 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 OR51A4Q8NGJ6 313 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 OR1N1Q8NGS0 311 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 OR14K1Q8NGZ2 314 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 ZDHHC19Q8WVZ1 309 aaPredicted RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 NINJ1Q92982 152 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 KISS1RQ969F8 398 aaPredicted RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 SLC25A38Q96DW6 304 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 C14orf79Q96F83 325 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 CFHR5Q9BXR6 569 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 NMNAT2Q9BZQ4 307 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 FAM186AA6NE01 2351 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 CCDC85CA6NKD9 419 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 SLC33A1O00400 549 aaPredicted RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 IGKV1D-16P01601 117 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 CELA2BP08218 269 aaPredicted RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 CXCL2P19875 107 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 OMGP23515 440 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 FKBP2P26885 142 aaKnown RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 RPL12P30050 165 aaKnown RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 FCGR2CP31995 323 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 GPR3P46089 330 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 FZD2Q14332 565 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 CEBPEQ15744 281 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 USF2Q15853 346 aaPredicted RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 TUSC1Q2TAM9 212 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 PHLDA2Q53GA4 152 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 ATPAF1Q5TC12 328 aaPredicted RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 LAMTOR1Q6IAA8 161 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 SLC16A14Q7RTX9 510 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 P4HA3Q7Z4N8 544 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 BPHLQ86WA6 291 aaPredicted RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 LILRB2Q8N423 598 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 OR9K2Q8NGE7 335 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 LHFPL5Q8TAF8 219 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 UQCC2Q9BRT2 126 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF2Q9BSG1 426 aaPredicted RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 DUSP23Q9BVJ7 150 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 CRISPLD2Q9H0B8 497 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 PARP12Q9H0J9 701 aaKnown RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF768Q9H5H4 540 aaKnown RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 NECAP2Q9NVZ3 263 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 LRFN1Q9P244 771 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 PADI1Q9ULC6 663 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 DTX4Q9Y2E6 619 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 MYLKQ15746 1914 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 SCN2AQ99250 2005 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 RP1P56715 2156 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 C9orf170A2RU37 121 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 PIN1P1O15428 100 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 PHF1O43189 567 aaPredicted RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 MPC2O95563 127 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 CNOT4O95628 575 aaKnown RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 RPS4Y1P22090 263 aaKnown RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 RPS18P62269 152 aaKnown RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 RPL23AP62750 156 aaKnown RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 RNF4P78317 190 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 SRPXP78539 464 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 FOXF1Q12946 379 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 RBM39Q14498 530 aaKnown RBP6□□□□□ -1.45
CSDE1-205ENST00000438362 ETFDHQ16134 617 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 Q6ZRG5 221 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 AAED1Q7RTV5 226 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF100Q8IYN0 542 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 ZFP82Q8N141 532 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 SLC38A9Q8NBW4 561 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 NAT6Q93015 286 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 MARVELD3Q96A59 401 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 SEH1LQ96EE3 360 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 MRGPRX4Q96LA9 322 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 OR5B12Q96R08 314 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 SOSTQ9BQB4 213 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 CTSFQ9UBX1 484 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 PILRAQ9UKJ1 303 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 WASF3Q9UPY6 502 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 PRELID3BQ9Y3B1 194 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 IGHV5-51A0A0C4DH38 117 aa5.99□□□□□ -1.45
CSDE1-205ENST00000438362 CCDC163A0A0D9SF12 145 aa5.99□□□□□ -1.45
CSDE1-205ENST00000438362 FTCDNL1E5RQL4 147 aa5.99□□□□□ -1.45
CSDE1-205ENST00000438362 MSTNO14793 375 aa5.99□□□□□ -1.45
CSDE1-205ENST00000438362 BET1O15155 118 aa5.99□□□□□ -1.45
CSDE1-205ENST00000438362 ST8SIA3O43173 380 aa5.99□□□□□ -1.45
CSDE1-205ENST00000438362 ZIC2O95409 532 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-205ENST00000438362 ITGB2P05107 769 aa5.99□□□□□ -1.45
CSDE1-205ENST00000438362 NMBP08949 121 aa5.99□□□□□ -1.45
CSDE1-205ENST00000438362 EFNB2P52799 333 aa5.99□□□□□ -1.45
CSDE1-205ENST00000438362 SUMO3P55854 103 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF121P58317 390 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-205ENST00000438362 NKX6-1P78426 367 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-205ENST00000438362 CLINT1Q14677 625 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms