RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SPAG17Q6Q759 2223 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 PCSK6P29122 969 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 UBE2G1P62253 170 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 OR2G3Q8NGZ4 309 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 OR51H1Q8NH63 302 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 TRGV10A0A0A0MS01 117 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 CXCL13O43927 109 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 ALOX5APP20292 161 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 MPLP40238 635 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 OIT3Q8WWZ8 545 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 YIPF5Q969M3 257 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 ESRP2Q9H6T0 727 aaKnown RBP14.35□□□□□ -0.11
PTPN13-204ENST00000436978 MTCH1Q9NZJ7 389 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 RAB27BO00194 218 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 FABP7O15540 132 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 HAAOP46952 286 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 ARHGEF39Q8N4T4 335 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 PKMYT1Q99640 499 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 PCYT1BQ9Y5K3 369 aaPredicted RBP14.34□□□□□ -0.11
PTPN13-204ENST00000436978 RPS10-NUDT3A0A1W2PQS6 291 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 ZC3H12DA2A288 527 aaKnown RBP14.34□□□□□ -0.11
PTPN13-204ENST00000436978 POM121CA8CG34 1229 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 CT45A10P0DMU9 189 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 TGM1P22735 817 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 RPS10P46783 165 aaKnown RBP14.34□□□□□ -0.11
PTPN13-204ENST00000436978 JMJD6Q6NYC1 403 aaPredicted RBP14.34□□□□□ -0.11
PTPN13-204ENST00000436978 ABI3BPQ7Z7G0 1075 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 MYEOVQ96EZ4 313 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 SSSCA1O60232 199 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 APEX1P27695 318 aaKnown RBP14.34□□□□□ -0.11
PTPN13-204ENST00000436978 THBS4P35443 961 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 GNPNAT1Q96EK6 184 aaPredicted RBP14.34□□□□□ -0.11
PTPN13-204ENST00000436978 TOX3O15405 576 aaPredicted RBP14.34□□□□□ -0.11
PTPN13-204ENST00000436978 ASAH1Q13510 395 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 LYSMD2Q8IV50 215 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 GABRG1Q8N1C3 465 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 FBXL4Q9UKA2 621 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 TEX51A0A1B0GUA7 166 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 TCRBV5S2A0A599 114 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 ETHE1O95571 254 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 B4GALT1P15291 398 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 PP6455Q8WZ26 134 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 KNL1Q8NG31 2342 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 SLC2A10O95528 541 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 TMUB2Q71RG4 321 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 OSR2Q8N2R0 312 aa14.34□□□□□ -0.11
PTPN13-204ENST00000436978 TRAV1-2A0A0B4J238 106 aa14.33□□□□□ -0.11
PTPN13-204ENST00000436978 ACOT6Q3I5F7 207 aaPredicted RBP14.33□□□□□ -0.11
PTPN13-204ENST00000436978 ACSM5Q6NUN0 579 aa14.33□□□□□ -0.11
PTPN13-204ENST00000436978 HCCSP53701 268 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 FUT7Q11130 342 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 FOXF1Q12946 379 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 MPPED2Q15777 294 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 GSG1Q2KHT4 349 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 OR2F2O95006 317 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 SCGB1D1O95968 90 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 OR2F1Q13607 317 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 PELI1Q96FA3 418 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 TPPP3Q9BW30 176 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 ZNF236Q9UL36 1845 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 IGLV3-16A0A075B6K0 115 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 A0A087WUJ7 227 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 ZNF705GA8MUZ8 300 aaPredicted RBP14.33□□□□□ -0.12
PTPN13-204ENST00000436978 OR1F12Q8NHA8 337 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 PATZ1Q9HBE1 687 aaKnown RBP14.33□□□□□ -0.12
PTPN13-204ENST00000436978 ZNF225Q9UK10 706 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 SOX18P35713 384 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 FAHD1Q6P587 224 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 THNSL2Q86YJ6 484 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 SLC39A7Q92504 469 aa14.33□□□□□ -0.12
PTPN13-204ENST00000436978 GPM6AP51674 278 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 MITD1Q8WV92 249 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 COMMD5Q9GZQ3 224 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 CSAG2Q9Y5P2 127 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 CHD5Q8TDI0 1954 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 AQP7O14520 342 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 TESK1Q15569 626 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 C3orf49Q96BT1 292 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 IFITM5A6NNB3 132 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 RPS16P62249 146 aaKnown RBP14.32□□□□□ -0.12
PTPN13-204ENST00000436978 ARHGDIGQ99819 225 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 ASB1Q9Y576 335 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 CDK5R1Q15078 307 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 SERTM1A2A2V5 107 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 RPL35P42766 123 aaKnown RBP14.32□□□□□ -0.12
PTPN13-204ENST00000436978 EMP3P54852 163 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 INSM1Q01101 510 aaPredicted RBP14.32□□□□□ -0.12
PTPN13-204ENST00000436978 CLPPQ16740 277 aaPredicted RBP14.32□□□□□ -0.12
PTPN13-204ENST00000436978 ADGRF3Q8IZF5 1079 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 C17orf78Q8N4C9 275 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 FGF20Q9NP95 211 aaPredicted RBP14.32□□□□□ -0.12
PTPN13-204ENST00000436978 TUBG2Q9NRH3 451 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 TFAP2AP05549 437 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 TMEM41BQ5BJD5 291 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 RIMKLAQ8IXN7 391 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 XKRY2A2RUG3 117 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 OIP5O43482 229 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 MT-ND4LP03901 98 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 GPBAR1Q8TDU6 330 aa14.32□□□□□ -0.12
PTPN13-204ENST00000436978 ROBO4Q8WZ75 1007 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms