RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 TCTE3Q8IZS6 198 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 TRIM63Q969Q1 353 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 ADAT3Q96EY9 351 aaPredicted RBP18.51■□□□□ 0.55
PTPRF-207ENST00000436724 MOB1AQ9H8S9 216 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 CKLFQ9UBR5 152 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 DOCK7Q96N67 2140 aa18.5■□□□□ 0.55
PTPRF-207ENST00000436724 ZNF724A8MTY0 619 aa18.5■□□□□ 0.55
PTPRF-207ENST00000436724 CST2P09228 141 aa18.5■□□□□ 0.55
PTPRF-207ENST00000436724 SPOCK1Q08629 439 aa18.5■□□□□ 0.55
PTPRF-207ENST00000436724 ZNF813Q6ZN06 617 aa18.5■□□□□ 0.55
PTPRF-207ENST00000436724 OR1J2Q8NGS2 313 aa18.5■□□□□ 0.55
PTPRF-207ENST00000436724 AKR7LQ8NHP1 331 aa18.5■□□□□ 0.55
PTPRF-207ENST00000436724 SLC25A38Q96DW6 304 aa18.5■□□□□ 0.55
PTPRF-207ENST00000436724 GPR84Q9NQS5 396 aa18.5■□□□□ 0.55
PTPRF-207ENST00000436724 SPTBN4Q9H254 2564 aa18.5■□□□□ 0.55
PTPRF-207ENST00000436724 SLC22A20A6NK97 555 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 SGCEO43556 437 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 CTSSP25774 331 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 PLA2G7Q13093 441 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 SFRP5Q5T4F7 317 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 SERPINA12Q8IW75 414 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 IZUMO1Q8IYV9 350 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 CMTM4Q8IZR5 234 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 RFT1Q96AA3 541 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 C12orf49Q9H741 205 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 FOXJ3Q9UPW0 622 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 WASF3Q9UPY6 502 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 SVILO95425 2214 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 MED12LQ86YW9 2145 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 A0A1B0GVI7 797 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 FSTP19883 344 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 SLC6A1P30531 599 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 ZNF169Q14929 603 aaPredicted RBP18.49■□□□□ 0.55
PTPRF-207ENST00000436724 SLC16A14Q7RTX9 510 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 APH1AQ96BI3 265 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 FAM71F1Q96KD3 344 aaPredicted RBP18.49■□□□□ 0.55
PTPRF-207ENST00000436724 KCNK15Q9H427 330 aa18.49■□□□□ 0.55
PTPRF-207ENST00000436724 MRPS7Q9Y2R9 242 aaKnown RBP18.49■□□□□ 0.55
PTPRF-207ENST00000436724 INMT-MINDY4F8WBC2 141 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 M0R135 149 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 ORC5O43913 435 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 ARSBP15848 533 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 OTX1P32242 354 aaPredicted RBP18.48■□□□□ 0.55
PTPRF-207ENST00000436724 GNALP38405 381 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 ARF1P84077 181 aaKnown RBP18.48■□□□□ 0.55
PTPRF-207ENST00000436724 PLA1AQ53H76 456 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 UBE2NLQ5JXB2 153 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 LIX1LQ8IVB5 337 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 ZNF799Q96GE5 643 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 LINC00470Q9BZP3 86 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 RNF122Q9H9V4 155 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 CGGBP1Q9UFW8 167 aaPredicted RBP18.48■□□□□ 0.55
PTPRF-207ENST00000436724 A0A096LPE4 126 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 A0A1W2PPZ6 126 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 SYNGR3O43761 229 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 ABOP16442 354 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 PSG4Q00888 419 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 IGFL3Q6UXB1 125 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 OR51D1Q8NGF3 324 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 PGAM5Q96HS1 289 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 STEAP1Q9UHE8 339 aa18.48■□□□□ 0.55
PTPRF-207ENST00000436724 CACNA1GO43497 2377 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 EEF1E1O43324 174 aaKnown RBP18.47■□□□□ 0.55
PTPRF-207ENST00000436724 HGFACQ04756 655 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 FAPQ12884 760 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 RAB35Q15286 201 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 ZNF100Q8IYN0 542 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 OR5M9Q8NGP3 310 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 CREB3L1Q96BA8 519 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 PRDM14Q9GZV8 571 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 UPB1Q9UBR1 384 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 PRSS50Q9UI38 385 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 BSNQ9UPA5 3926 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 ZNF587BE7ETH6 402 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 CALCBP10092 127 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 CRYGSP22914 178 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 AGTR1P30556 359 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 BTCP35070 178 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 EIF2S3P41091 472 aaKnown RBP18.47■□□□□ 0.55
PTPRF-207ENST00000436724 RAB25P57735 213 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 RRAS2P62070 204 aaPredicted RBP18.47■□□□□ 0.55
PTPRF-207ENST00000436724 SCRN3Q0VDG4 424 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 PYHIN1Q6K0P9 492 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 LILRB4Q8NHJ6 448 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 SYNPRQ8TBG9 265 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 LYZL4Q96KX0 146 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 LUZP4Q9P127 313 aa18.47■□□□□ 0.55
PTPRF-207ENST00000436724 ARHGAP21Q5T5U3 1957 aa18.46■□□□□ 0.55
PTPRF-207ENST00000436724 ARPC4-TTLL3A0A0A6YYG9 625 aa18.46■□□□□ 0.55
PTPRF-207ENST00000436724 SNAI3Q3KNW1 292 aa18.46■□□□□ 0.55
PTPRF-207ENST00000436724 SLC36A2Q495M3 483 aa18.46■□□□□ 0.55
PTPRF-207ENST00000436724 SPACA3Q8IXA5 215 aa18.46■□□□□ 0.55
PTPRF-207ENST00000436724 OR1F12Q8NHA8 337 aa18.46■□□□□ 0.55
PTPRF-207ENST00000436724 ZFP3Q96NJ6 502 aa18.46■□□□□ 0.55
PTPRF-207ENST00000436724 OR2H1Q9GZK4 316 aa18.46■□□□□ 0.55
PTPRF-207ENST00000436724 WNT5BQ9H1J7 359 aa18.46■□□□□ 0.55
PTPRF-207ENST00000436724 ABCG5Q9H222 651 aa18.46■□□□□ 0.55
PTPRF-207ENST00000436724 SLC17A5Q9NRA2 495 aa18.46■□□□□ 0.55
PTPRF-207ENST00000436724 ZNF224Q9NZL3 707 aa18.46■□□□□ 0.55
PTPRF-207ENST00000436724 DSPP15924 2871 aaKnown RBP18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms