RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 APOBEC3HQ6NTF7 200 aaKnown RBP3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 FAHD1Q6P587 224 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 ZNF836Q6ZNA1 936 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 RTL4Q6ZR62 310 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 LINC00336Q6ZUF6 198 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 COX15Q7KZN9 410 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 ASCL5Q7RTU5 278 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 RNF175Q8N4F7 328 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 TBC1D19Q8N5T2 526 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 C11orf42Q8N5U0 333 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 MS4A15Q8N5U1 240 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 EID2Q8N6I1 236 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 ZNF557Q8N988 423 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 ATP6V1C2Q8NEY4 427 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 VN1R2Q8NFZ6 395 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 OR6X1Q8NH79 312 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 MCOLN3Q8TDD5 553 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 BAALCQ8WXS3 180 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 CDS1Q92903 461 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 FGF14Q92915 247 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 RPEQ96AT9 228 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 CMTM5Q96DZ9 223 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 CENPNQ96H22 339 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 FCRL1Q96LA6 429 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 ZNF75AQ96N20 296 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 COPS4Q9BT78 406 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 RSG1Q9BU20 258 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 FAIM2Q9BWQ8 316 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 ING2Q9H160 280 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 NEUROG2Q9H2A3 272 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 ARMC7Q9H6L4 198 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 PLEKHA1Q9HB21 404 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 PATZ1Q9HBE1 687 aaKnown RBP3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 RETNQ9HD89 108 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 PRR34Q9NV39 138 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 PLEKHJ1Q9NW61 149 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 MAT2BQ9NZL9 334 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 NEUROG3Q9Y4Z2 214 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 KIF25-AS1Q9Y6Z4 181 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 PDS5BQ9NTI5 1447 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 NISCHQ9Y2I1 1504 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 LOC105371267A0A1B0GV96 52 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 PSMB11A5LHX3 300 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 GJE1A6NN92 205 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 CDC7O00311 574 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 SLC16A4O15374 487 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 EIF3GO75821 320 aaKnown RBP eCLIP3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 LYPLA2O95372 231 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 IFNA14P01570 189 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 RPS17P08708 135 aaKnown RBP3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 OR4E1P0C645 316 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 HSPD1P10809 573 aaKnown RBP3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 CTRB1P17538 263 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 HLA-GP17693 338 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 G0S2P27469 103 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 CAPZBP47756 277 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 PRLHRP49683 370 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 SSR4P51571 173 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 MNAT1P51948 309 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 NKX2-5P52952 324 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 CLDN6P56747 220 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 MGAT3Q09327 533 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 C2orf80Q0P641 193 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 ECH1Q13011 328 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 NAB1Q13506 487 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 TPBGQ13641 420 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 TMEM249Q2WGJ8 235 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 AKIRIN2Q53H80 203 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 PAGE3Q5JUK9 113 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 CTRB2Q6GPI1 263 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 ADNP2Q6IQ32 1131 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 CNIH2Q6PI25 160 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 CD300LGQ6UXG3 332 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 TGIF2LYQ8IUE0 185 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 PGAM4Q8N0Y7 254 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 CYP4Z2PQ8N1L4 340 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 Q8N402 240 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 TMEM156Q8N614 296 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 CCNYL1Q8N7R7 359 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 OR5AK3PQ8NH89 298 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 DTD1Q8TEA8 209 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 SDR42E1Q8WUS8 393 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 IFT81Q8WYA0 676 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 ARPC1AQ92747 370 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 S100PBPQ96BU1 408 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 SLC35E1Q96K37 410 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 RNF145Q96MT1 663 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 CIB1Q99828 191 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 RASL11BQ9BPW5 248 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 PORCNQ9H237 461 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 PDFQ9HBH1 243 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 FGF20Q9NP95 211 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 LSM7Q9UK45 103 aaKnown RBP3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 SLC22A13Q9Y226 551 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 AK9Q5TCS8 1911 aa3.23□□□□□ -1.89
HMGB1P45-201ENST00000435986 FHAD1B1AJZ9 1412 aa3.22□□□□□ -1.89
HMGB1P45-201ENST00000435986 A0A0G2JN53 185 aa3.22□□□□□ -1.89
HMGB1P45-201ENST00000435986 A0A1W2PQL4 384 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P45-201ENST00000435986 ARGFXA6NJG6 315 aa3.22□□□□□ -1.89
HMGB1P45-201ENST00000435986 KLLNB2CW77 178 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms