RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 HCAR3P49019 387 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 CDH17Q12864 832 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 CHRFAM7AQ494W8 412 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 AGBL2Q5U5Z8 902 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 SPECC1LQ69YQ0 1117 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 ARL9Q6T311 187 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 NPSR1Q6W5P4 371 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 FAM71AQ8IYT1 594 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 METTL13Q8N6R0 699 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 ZNF321PQ8N8H1 164 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 PROKR2Q8NFJ6 384 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 OR52E2Q8NGJ4 325 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 OR52K1Q8NGK4 314 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 ZFP90Q8TF47 636 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 CSPG4P5Q96PW8 444 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 ABCC6O95255 1503 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 MROH7-TTC4A0A0A0MT08 1334 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 SSH2Q76I76 1423 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 SMG6Q86US8 1419 aaKnown RBP3.97□□□□□ -1.77
USP54-206ENST00000433394 PHRF1Q9P1Y6 1649 aaKnown RBP3.97□□□□□ -1.77
USP54-206ENST00000433394 PLPP1O14494 284 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 BCKDKO14874 412 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 CD5LO43866 347 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 E2F6O75461 281 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 FARS2O95363 451 aaKnown RBP3.97□□□□□ -1.77
USP54-206ENST00000433394 RAB7AP51149 207 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 RND2P52198 227 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 ZNF136P52737 540 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 DAOAP59103 153 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 PPP1CBP62140 327 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 RAP1AP62834 184 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 TRMT5Q32P41 509 aaKnown RBP3.97□□□□□ -1.77
USP54-206ENST00000433394 HIKESHIQ53FT3 197 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 METTL21CQ5VZV1 264 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 ADNP2Q6IQ32 1131 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 RWDD4Q6NW29 188 aaKnown RBP3.97□□□□□ -1.77
USP54-206ENST00000433394 ULK3Q6PHR2 472 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 C12orf54Q6X4T0 127 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 MTERF4Q7Z6M4 381 aaKnown RBP3.97□□□□□ -1.77
USP54-206ENST00000433394 LINC00523Q86TU6 105 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 VKORC1L1Q8N0U8 176 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 STPG2Q8N412 459 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 NOXO1Q8NFA2 376 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 OR52E5Q8NH55 327 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 ABHD3Q8WU67 409 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 PIH1D2Q8WWB5 315 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 DCPSQ96C86 337 aaKnown RBP3.97□□□□□ -1.77
USP54-206ENST00000433394 SDHCQ99643 169 aaPredicted RBP3.97□□□□□ -1.77
USP54-206ENST00000433394 GPR21Q99679 349 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 C8orf33Q9H7E9 229 aaPredicted RBP3.97□□□□□ -1.77
USP54-206ENST00000433394 NOX3Q9HBY0 568 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 SLC39A1Q9NY26 324 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 SBNO1A3KN83 1393 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 ARHGEF10O15013 1369 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 TMEM94Q12767 1356 aa3.97□□□□□ -1.77
USP54-206ENST00000433394 CDK12Q9NYV4 1490 aaPredicted RBP3.97□□□□□ -1.77
USP54-206ENST00000433394 RGPD8O14715 1765 aaPredicted RBP3.97□□□□□ -1.77
USP54-206ENST00000433394 ASTN1O14525 1302 aa3.96□□□□□ -1.77
USP54-206ENST00000433394 ZBED9Q6R2W3 1325 aa3.96□□□□□ -1.77
USP54-206ENST00000433394 MAP2P11137 1827 aaKnown RBP3.96□□□□□ -1.78
USP54-206ENST00000433394 ARPC4-TTLL3A0A0A6YYG9 625 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 A0A1W2PP18 115 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 SERPINE3A8MV23 424 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 H0YHG0 523 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 ANGPTL7O43827 346 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 AQP8O94778 261 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 EIF4EP06730 217 aaKnown RBP3.96□□□□□ -1.78
USP54-206ENST00000433394 MYL9P24844 172 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 CRISP3P54108 245 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 PSMD4P55036 377 aaKnown RBP3.96□□□□□ -1.78
USP54-206ENST00000433394 YWHAEP62258 255 aaKnown RBP3.96□□□□□ -1.78
USP54-206ENST00000433394 TFDP2Q14188 446 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 IRF4Q15306 451 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 SYCP1Q15431 976 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 RGNQ15493 299 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 ORMDL2Q53FV1 153 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 H3F3CQ6NXT2 135 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 TIFABQ6ZNK6 161 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 FAM92BQ6ZTR7 304 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 ZNF786Q8N393 782 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 C17orf50Q8WW18 174 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 APH1AQ96BI3 265 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 FOPNLQ96NB1 174 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 FOXC2Q99958 501 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 SLC17A9Q9BYT1 436 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 NEUROG2Q9H2A3 272 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 LZTFL1Q9NQ48 299 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 ZMAT5Q9UDW3 170 aaKnown RBP3.96□□□□□ -1.78
USP54-206ENST00000433394 YARS2Q9Y2Z4 477 aaKnown RBP3.96□□□□□ -1.78
USP54-206ENST00000433394 CHTOPQ9Y3Y2 248 aaKnown RBP3.96□□□□□ -1.78
USP54-206ENST00000433394 HYOU1Q9Y4L1 999 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 RTL1A6NKG5 1358 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 STRCP1A6NGW2 1772 aa3.96□□□□□ -1.78
USP54-206ENST00000433394 PHLPP2Q6ZVD8 1323 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 OVOS2A0A0J9YW53 1432 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 OVOS2Q6IE36 1432 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 XIRP1Q702N8 1843 aaKnown RBP3.95□□□□□ -1.78
USP54-206ENST00000433394 C1orf167Q5SNV9 1468 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 IGLV4-69A0A075B6H9 119 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 IGHV5-51A0A0C4DH38 117 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms