RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 LHX6Q9UPM6 363 aa9.46□□□□□ -0.89
PKNOX1-203ENST00000432907 RCL1Q9Y2P8 373 aaKnown RBP9.46□□□□□ -0.89
PKNOX1-203ENST00000432907 AKAP11Q9UKA4 1901 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 COL5A3P25940 1745 aaPredicted RBP9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 A8MVM7 634 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 CTDSPLO15194 276 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 AKR7A3O95154 331 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 SYNGR4O95473 234 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 OR5H8P0DN80 308 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 PRPH2P23942 346 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 MFAP5Q13361 173 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 C1orf61Q13536 156 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 TIGITQ495A1 244 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 COL5A1-AS1Q5SY13 56 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 LDLRAD3Q86YD5 345 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 TMEFF1Q8IYR6 380 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 C17orf47Q8NEP4 570 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 KLHDC9Q8NEP7 349 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 DMBX1Q8NFW5 382 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 NRIP2Q9BQI9 281 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 CXCL16Q9H2A7 254 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 KLF15Q9UIH9 416 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 NUP214P35658 2090 aaPredicted RBP9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 SHANK3Q9BYB0 1731 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 GFYI3L273 518 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 TBX19O60806 448 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 LIMK1P53667 647 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 NHLH2Q02577 135 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 TMEM241Q24JQ0 296 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 AGBL4Q5VU57 503 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 LRP11Q86VZ4 500 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 MFSD9Q8NBP5 474 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 SLC35A4Q96G79 324 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 SDF2Q99470 211 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 MAP3K3Q99759 626 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 ESRP2Q9H6T0 727 aaKnown RBP9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 COA3Q9Y2R0 106 aaPredicted RBP9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 CACNA1SQ13698 1873 aa9.46□□□□□ -0.9
PKNOX1-203ENST00000432907 DUS4LO95620 317 aaKnown RBP9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 ASCL1P50553 236 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 EGR3Q06889 387 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 ABHD17CQ6PCB6 329 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 PARS2Q7L3T8 475 aaKnown RBP9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 SLC16A14Q7RTX9 510 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 CMTM2Q8TAZ6 248 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 KCNJ15Q99712 375 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 PLEKHF2Q9H8W4 249 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 CDC14CA4D256 554 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 SOX15O60248 233 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 OR10J1P30954 320 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 OPRM1P35372 400 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 CD96P40200 585 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 RPL24P83731 157 aaKnown RBP9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 FAM162BQ5T6X4 162 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 FAM122AQ96E09 287 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 PELI1Q96FA3 418 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 KLF16Q9BXK1 252 aaPredicted RBP9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 SHARPINQ9H0F6 387 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 ACAD8Q9UKU7 415 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 TRAPPC2LQ9UL33 140 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 IGLV3-10A0A075B6K4 115 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 RBFOX3A6NFN3 312 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 ANKRD30BLA7E2S9 258 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 ZNF814B7Z6K7 855 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 ZIC2O95409 532 aaPredicted RBP9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 KLF9Q13886 244 aaPredicted RBP9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 ASTLQ6HA08 431 aaPredicted RBP9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 GKN2Q86XP6 184 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 OR11H4Q8NGC9 324 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 OR10A7Q8NGE5 316 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 MRPS24Q96EL2 167 aaKnown RBP9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 ZNF831Q5JPB2 1677 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 LOC102725191A0A1B0GVB3 256 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 ZBTB42B2RXF5 422 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 GPANK1O95872 356 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 GSTP1P09211 210 aaKnown RBP9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 COX5AP20674 150 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 TBXA2RP21731 343 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 DTYMKP23919 212 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 ERVS71-1P61550 626 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 GABREP78334 506 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 PMP22Q01453 160 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 ZNF660Q6AZW8 331 aaPredicted RBP9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 C17orf78Q8N4C9 275 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 TPPP3Q9BW30 176 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 MSL2Q9HCI7 577 aa9.45□□□□□ -0.9
PKNOX1-203ENST00000432907 MPTX1A8MV57 137 aa9.44□□□□□ -0.9
PKNOX1-203ENST00000432907 GPR37O15354 613 aa9.44□□□□□ -0.9
PKNOX1-203ENST00000432907 CTAG2O75638 210 aa9.44□□□□□ -0.9
PKNOX1-203ENST00000432907 CRHP06850 196 aa9.44□□□□□ -0.9
PKNOX1-203ENST00000432907 RNF224P0DH78 156 aa9.44□□□□□ -0.9
PKNOX1-203ENST00000432907 OTX2P32243 289 aa9.44□□□□□ -0.9
PKNOX1-203ENST00000432907 PTGER4P35408 488 aa9.44□□□□□ -0.9
PKNOX1-203ENST00000432907 PNRC1Q12796 327 aaPredicted RBP9.44□□□□□ -0.9
PKNOX1-203ENST00000432907 AGERQ15109 404 aa9.44□□□□□ -0.9
PKNOX1-203ENST00000432907 ZNF684Q5T5D7 378 aa9.44□□□□□ -0.9
PKNOX1-203ENST00000432907 SLC39A5Q6ZMH5 540 aa9.44□□□□□ -0.9
PKNOX1-203ENST00000432907 TGIF2LXQ8IUE1 241 aa9.44□□□□□ -0.9
PKNOX1-203ENST00000432907 LRRC18Q8N456 261 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms