RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 CXCL12P48061 93 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 AKR1D1P51857 326 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 CLDN12P56749 244 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 TLE1Q04724 770 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 NKAPLQ5M9Q1 402 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 FAM74A1Q5RGS3 127 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 PHF19Q5T6S3 580 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 SLC16A9Q7RTY1 509 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 PARGQ86W56 976 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 STX12Q86Y82 276 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 FAM90A1Q86YD7 464 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 MISPQ8IVT2 679 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 PAQR4Q8N4S7 273 aaPredicted RBP7.21□□□□□ -1.25
VTI1A-202ENST00000432306 C2orf73Q8N5S3 287 aaPredicted RBP7.21□□□□□ -1.25
VTI1A-202ENST00000432306 ZNF433Q8N7K0 673 aaPredicted RBP7.21□□□□□ -1.25
VTI1A-202ENST00000432306 OR51A7Q8NH64 312 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 MITD1Q8WV92 249 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 RNF141Q8WVD5 230 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 TSEN15Q8WW01 171 aaKnown RBP7.21□□□□□ -1.25
VTI1A-202ENST00000432306 HMGB4Q8WW32 186 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 RAB24Q969Q5 203 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 CHST6Q9GZX3 395 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 TUBA4BQ9H853 241 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 MRPS30Q9NP92 439 aaKnown RBP7.21□□□□□ -1.25
VTI1A-202ENST00000432306 GDE1Q9NZC3 331 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 FLRT3Q9NZU0 649 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 TINAGQ9UJW2 476 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 SLC27A6Q9Y2P4 619 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 ZNF337Q9Y3M9 751 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 KIAA1549LQ6ZVL6 1849 aa7.21□□□□□ -1.25
VTI1A-202ENST00000432306 LOC100289279A0A1B0GTE1 492 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 A0A1B0GWA3 101 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 DBX1A6NMT0 343 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 COLCA2A8K830 154 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 PRR32B1ATL7 298 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 CCL16O15467 120 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 EIF3GO75821 320 aaKnown RBP eCLIP7.21□□□□□ -1.26
VTI1A-202ENST00000432306 NKX2-2O95096 273 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 TXNDC12O95881 172 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 ACTL6AO96019 429 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 CD3DP04234 171 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 CRYBA1P05813 215 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 NGFRP08138 427 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 CISD3P0C7P0 127 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 FAM157CP0CG43 387 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 SPP1P10451 314 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 PTHLHP12272 177 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 TPT1P13693 172 aaKnown RBP7.21□□□□□ -1.26
VTI1A-202ENST00000432306 GTF2F2P13984 249 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 PPICP45877 212 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 PNLIPRP2P54317 469 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 PRPS1P60891 318 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 EGR3Q06889 387 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 DHRS2Q13268 280 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 TEAD2Q15562 447 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 ZNF77Q15935 545 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 H3F3CQ6NXT2 135 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 TMEM205Q6UW68 189 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 C8orf86Q6ZUL3 223 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 SLC25A42Q86VD7 318 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 CDC20BQ86Y33 519 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 GALNT16Q8N428 558 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 C15orf54Q8N8G6 183 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 ZDHHC22Q8N966 263 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 OR2L3Q8NG85 312 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 OR4A4PQ8NGN8 299 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 OR4K13Q8NH42 304 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 OR5AK2Q8NH90 309 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 THAP6Q8TBB0 222 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 ARRDC3Q96B67 414 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 ELSPBP1Q96BH3 223 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 HSPA12BQ96MM6 686 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 TIMM29Q9BSF4 260 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 PTDSS2Q9BVG9 487 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 OR51M1Q9H341 326 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 C6orf106Q9H6K1 298 aaPredicted RBP7.21□□□□□ -1.26
VTI1A-202ENST00000432306 TMEM185BQ9H7F4 350 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 LMAN1LQ9HAT1 526 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 COMMD9Q9P000 198 aa7.21□□□□□ -1.26
VTI1A-202ENST00000432306 MRM2Q9UI43 246 aaKnown RBP7.21□□□□□ -1.26
VTI1A-202ENST00000432306 DENND4CQ5VZ89 1909 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 SH2D7A6NKC9 451 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-202ENST00000432306 GNB5O14775 395 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 PHYHO14832 338 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 TM4SF5O14894 197 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 LDLRAD4O15165 306 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 FGF19O95750 216 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 CD14P08571 375 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 SLC35G4P0C7Q5 338 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 ZNF806P0C7X5 589 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 ADRB3P13945 408 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 CPMP14384 443 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 FSTP19883 344 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 PTGER1P34995 402 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 NAA10P41227 235 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-202ENST00000432306 ALDH3B1P43353 468 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 CLDN2P57739 230 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 RAB5BP61020 215 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 CDK3Q00526 305 aa7.2□□□□□ -1.26
VTI1A-202ENST00000432306 RASGEF1BQ0VAM2 473 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms