RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 RBM48Q5RL73 367 aaKnown RBP12.99□□□□□ -0.33
CDRT15-202ENST00000431716 SPATA46Q5T0L3 261 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 TMPRSS11AQ6ZMR5 421 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 AHSA2Q719I0 299 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 FAM57BQ71RH2 274 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 HAVCR2Q8TDQ0 301 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 HAVCR1Q96D42 359 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 PGAM5Q96HS1 289 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 ZNF649Q9BS31 505 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 TRAF4Q9BUZ4 470 aaPredicted RBP12.99□□□□□ -0.33
CDRT15-202ENST00000431716 MRPL37Q9BZE1 423 aaKnown RBP12.99□□□□□ -0.33
CDRT15-202ENST00000431716 RGCCQ9H4X1 137 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 OPA3Q9H6K4 179 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 BRD7Q9NPI1 651 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 FAM206AQ9NX38 181 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 ZNF391Q9UJN7 358 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 BLOC1S6Q9UL45 172 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 LAMP3Q9UQV4 416 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 LRRC42Q9Y546 428 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 SNX5Q9Y5X3 404 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 R4GMQ9 66 aa12.99□□□□□ -0.33
CDRT15-202ENST00000431716 IGLV3-9A0A075B6K5 115 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 TMEM129A0AVI4 362 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 PTGES3LE9PB15 166 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 LOC110117498-PIK3R3F6TDL0 507 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 J3QLW9 94 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 TBX1O43435 398 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 CD8AP01732 235 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 LIMS3P0CW19 117 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 LIMS4P0CW20 117 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 SELEP16581 610 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 ZNF19P17023 458 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 CFL1P23528 166 aaKnown RBP12.98□□□□□ -0.33
CDRT15-202ENST00000431716 CRHBPP24387 322 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 OR12D2P58182 307 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 SNRPD2P62316 118 aaKnown RBP12.98□□□□□ -0.33
CDRT15-202ENST00000431716 MRPL28Q13084 256 aaKnown RBP12.98□□□□□ -0.33
CDRT15-202ENST00000431716 MSMPQ1L6U9 139 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 MST1LQ2TV78 715 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 SNAI3Q3KNW1 292 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 TP53I3Q53FA7 332 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 ZNF786Q8N393 782 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 ITFG2Q969R8 447 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 CMBLQ96DG6 245 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 CCL19Q99731 98 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 SYT3Q9BQG1 590 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 RHNO1Q9BSD3 238 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 YTHDF1Q9BYJ9 559 aaKnown RBP12.98□□□□□ -0.33
CDRT15-202ENST00000431716 DUSP21Q9H596 190 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 MOB1AQ9H8S9 216 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 BEX4Q9NWD9 120 aaPredicted RBP12.98□□□□□ -0.33
CDRT15-202ENST00000431716 UBAP1Q9NZ09 502 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 PTTG3PQ9NZH4 202 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 FZR1Q9UM11 496 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 CAB39Q9Y376 341 aaPredicted RBP12.98□□□□□ -0.33
CDRT15-202ENST00000431716 PMF1-BGLAPU3KQ54 211 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 ARFGEF3Q5TH69 2177 aa12.98□□□□□ -0.33
CDRT15-202ENST00000431716 ARID1AO14497 2285 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 USF3Q68DE3 2245 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 A0A1W2PPW3 197 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 SRSF10O75494 262 aaKnown RBP12.97□□□□□ -0.33
CDRT15-202ENST00000431716 RPP14O95059 124 aaKnown RBP12.97□□□□□ -0.33
CDRT15-202ENST00000431716 CLPTM1O96005 669 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 MT-ND5P03915 603 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 CDK1P06493 297 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 CD53P19397 219 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 KITLGP21583 273 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 LIPAP38571 399 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 ETV1P50549 477 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 SLC35A2P78381 396 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 PSG7Q13046 419 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 GK2Q14410 553 aaPredicted RBP12.97□□□□□ -0.33
CDRT15-202ENST00000431716 HLXQ14774 488 aaPredicted RBP12.97□□□□□ -0.33
CDRT15-202ENST00000431716 TIGD6Q17RP2 521 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 GLYATL3Q5SZD4 288 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 RNLSQ5VYX0 342 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 C11orf71Q6IPW1 123 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 PGAP1Q75T13 922 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 MRPL21Q7Z2W9 205 aaKnown RBP12.97□□□□□ -0.33
CDRT15-202ENST00000431716 LRP11Q86VZ4 500 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 KLHL36Q8N4N3 616 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 IGFBPL1Q8WX77 278 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 RORBQ92753 470 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 SPSB4Q96A44 273 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 SGK3Q96BR1 496 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 C4orf36Q96KX1 117 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 SIGLEC11Q96RL6 698 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 REPIN1Q9BWE0 567 aaKnown RBP12.97□□□□□ -0.33
CDRT15-202ENST00000431716 PBOV1Q9GZY1 135 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 CXXC4Q9H2H0 198 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 POFUT1Q9H488 388 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 CXorf56Q9H5V9 222 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 CYSLTR2Q9NS75 346 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 ACOXLQ9NUZ1 547 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 CGGBP1Q9UFW8 167 aaPredicted RBP12.97□□□□□ -0.33
CDRT15-202ENST00000431716 NUFIP1Q9UHK0 495 aaKnown RBP12.97□□□□□ -0.33
CDRT15-202ENST00000431716 OR52A1Q9UKL2 312 aa12.97□□□□□ -0.33
CDRT15-202ENST00000431716 A0A0U1RQV5 110 aa12.96□□□□□ -0.33
CDRT15-202ENST00000431716 PNPP00491 289 aa12.96□□□□□ -0.33
CDRT15-202ENST00000431716 C21orf33P30042 268 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms