RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 B3GALT5-AS1P59052 145 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 TAS2R19P59542 299 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 RBMS2Q15434 407 aaKnown RBP11.33□□□□□ -0.6
DDX56-204ENST00000431640 GLDNQ6ZMI3 551 aaPredicted RBP11.33□□□□□ -0.6
DDX56-204ENST00000431640 ZNF782Q6ZMW2 699 aaPredicted RBP11.33□□□□□ -0.6
DDX56-204ENST00000431640 ZNF627Q7L945 461 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 TMEM123Q8N131 208 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 BEST3Q8N1M1 668 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 IL22RA1Q8N6P7 574 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 ZNF283Q8N7M2 679 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 TMEM229BQ8NBD8 167 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 OR11H7Q8NGC8 314 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 OR1J2Q8NGS2 313 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 OR51E1Q8TCB6 317 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 NUDT16L1Q9BRJ7 211 aaKnown RBP11.33□□□□□ -0.6
DDX56-204ENST00000431640 PNRC2Q9NPJ4 139 aaKnown RBP11.33□□□□□ -0.6
DDX56-204ENST00000431640 FBLN5Q9UBX5 448 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 CACNA1CQ13936 2221 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 TNFSF11O14788 317 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 ARPC1BO15143 372 aaKnown RBP11.32□□□□□ -0.6
DDX56-204ENST00000431640 RER1O15258 196 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 DOK2O60496 412 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 WDPCPO95876 746 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 GSTT2P0CG29 244 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 GTF2F2P13984 249 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 CPN1P15169 458 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 HOXD11P31277 338 aaPredicted RBP11.32□□□□□ -0.6
DDX56-204ENST00000431640 CX3CR1P49238 355 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 HIST1H3AP68431 136 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 GALK2Q01415 458 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 LINC00303Q3SY05 128 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 PDSS1Q5T2R2 415 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 HIST2H3PS2Q5TEC6 136 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 HIST2H3AQ71DI3 136 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 C20orf196Q8IYI0 205 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 FAM46BQ96A09 425 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 SEH1LQ96EE3 360 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 IP6K3Q96PC2 410 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 ZNF416Q9BWM5 594 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 CNTD2Q9H8S5 307 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 ABI3Q9P2A4 366 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 UPB1Q9UBR1 384 aa11.32□□□□□ -0.6
DDX56-204ENST00000431640 EFSO43281 561 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 LMX1BO60663 402 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 KLK2P20151 261 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 CASRP41180 1078 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 VEGFCP49767 419 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 MRPS34P82930 218 aaKnown RBP11.31□□□□□ -0.6
DDX56-204ENST00000431640 OC90Q02509 493 aaPredicted RBP11.31□□□□□ -0.6
DDX56-204ENST00000431640 RIPPLY1Q0D2K3 151 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 PMPCAQ10713 525 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 TMEM255AQ5JRV8 349 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 FAM27BQ5VT28 67 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 B3GNTL1Q67FW5 361 aaPredicted RBP11.31□□□□□ -0.6
DDX56-204ENST00000431640 UTS2BQ765I0 119 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 COMMD2Q86X83 199 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 PIAS4Q8N2W9 510 aaPredicted RBP11.31□□□□□ -0.6
DDX56-204ENST00000431640 SPICQ8N5J4 248 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 MEIOBQ8N635 442 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 ZIC4Q8N9L1 334 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 OR8B12Q8NGG6 310 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 OR4D6Q8NGJ1 314 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 ADAT3Q96EY9 351 aaPredicted RBP11.31□□□□□ -0.6
DDX56-204ENST00000431640 ZNF385AQ96PM9 386 aaKnown RBP11.31□□□□□ -0.6
DDX56-204ENST00000431640 RBM24Q9BX46 236 aaKnown RBP11.31□□□□□ -0.6
DDX56-204ENST00000431640 ZFP64Q9NPA5 681 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 SCP2D1Q9UJQ7 156 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 FOXD3Q9UJU5 478 aaPredicted RBP11.31□□□□□ -0.6
DDX56-204ENST00000431640 BOKQ9UMX3 212 aaPredicted RBP11.31□□□□□ -0.6
DDX56-204ENST00000431640 FLVCR2Q9UPI3 526 aa11.31□□□□□ -0.6
DDX56-204ENST00000431640 IGHV3-15A0A0B4J1V0 119 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 A0A0U1RQV5 110 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 CDK2AP1O14519 115 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 CREBL2O60519 120 aaPredicted RBP11.3□□□□□ -0.6
DDX56-204ENST00000431640 KDM4BO94953 1096 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 CHRM2P08172 466 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 MELTFP08582 738 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 ZNF93P35789 620 aaPredicted RBP11.3□□□□□ -0.6
DDX56-204ENST00000431640 STEAP1BQ6NZ63 245 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 TMEM53Q6P2H8 277 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 OR2W3Q7Z3T1 314 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 ABHD12BQ7Z5M8 362 aaPredicted RBP11.3□□□□□ -0.6
DDX56-204ENST00000431640 YRDCQ86U90 279 aaKnown RBP11.3□□□□□ -0.6
DDX56-204ENST00000431640 BIVMQ86UB2 503 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 CLEC1AQ8NC01 280 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 BEST4Q8NFU0 473 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 OR52N4Q8NGI2 321 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 OR4C16Q8NGL9 310 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 OR2V1Q8NHB1 315 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 ZNF431Q8TF32 576 aaPredicted RBP11.3□□□□□ -0.6
DDX56-204ENST00000431640 PSMF1Q92530 271 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 SPTSSAQ969W0 71 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 C10orf35Q96D05 121 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 PGAM5Q96HS1 289 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 THOC3Q96J01 351 aaKnown RBP11.3□□□□□ -0.6
DDX56-204ENST00000431640 SFXN2Q96NB2 322 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 UCN2Q96RP3 112 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 ULBP2Q9BZM5 246 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 ZNF436Q9C0F3 470 aaPredicted RBP11.3□□□□□ -0.6
DDX56-204ENST00000431640 GPR84Q9NQS5 396 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms