RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 VRK1Q99986 396 aaPredicted RBP8.63□□□□□ -1.03
ATG4B-212ENST00000430617 C1QTNF6Q9BXI9 259 aa8.63□□□□□ -1.03
ATG4B-212ENST00000430617 LPAR2Q9HBW0 351 aa8.63□□□□□ -1.03
ATG4B-212ENST00000430617 GPR35Q9HC97 309 aa8.63□□□□□ -1.03
ATG4B-212ENST00000430617 MYOZ1Q9NP98 299 aaPredicted RBP8.63□□□□□ -1.03
ATG4B-212ENST00000430617 SLC7A10Q9NS82 523 aa8.63□□□□□ -1.03
ATG4B-212ENST00000430617 PARPBPQ9NWS1 579 aa8.63□□□□□ -1.03
ATG4B-212ENST00000430617 HIF1ANQ9NWT6 349 aa8.63□□□□□ -1.03
ATG4B-212ENST00000430617 KCNG2Q9UJ96 466 aa8.63□□□□□ -1.03
ATG4B-212ENST00000430617 ERGIC3Q9Y282 383 aa8.63□□□□□ -1.03
ATG4B-212ENST00000430617 CAB39Q9Y376 341 aaPredicted RBP8.63□□□□□ -1.03
ATG4B-212ENST00000430617 LOC105371242A0A075B767 164 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 DAPL1A0PJW8 107 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 DPPA5A6NC42 116 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 B4DSR2 109 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 ZNF670-ZNF695F2Z2N8 137 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 M0R1B8 84 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 LALBAP00709 142 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 HLA-DQA2P01906 255 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 SPARCP09486 303 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 COX5AP20674 150 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 CDAP32320 146 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 HCCSP53701 268 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 ACTA2P62736 377 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 ACTG2P63267 376 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 ROR2Q01974 943 aaKnown RBP8.62□□□□□ -1.03
ATG4B-212ENST00000430617 SRSF4Q08170 494 aaKnown RBP8.62□□□□□ -1.03
ATG4B-212ENST00000430617 ACSM1Q08AH1 577 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 SCGB2A2Q13296 93 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 ENDOGQ14249 297 aaKnown RBP8.62□□□□□ -1.03
ATG4B-212ENST00000430617 SPHARQ15513 63 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 CEACAM16Q2WEN9 425 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 FOXB2Q5VYV0 432 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 ZNF627Q7L945 461 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 DPY19L4Q7Z388 723 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 LHFPL3Q86UP9 236 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 GLCCI1Q86VQ1 547 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 GPR137CQ8N3F9 429 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 ZNF454Q8N9F8 522 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 SPRYD4Q8WW59 207 aaPredicted RBP8.62□□□□□ -1.03
ATG4B-212ENST00000430617 RNF166Q96A37 237 aaPredicted RBP8.62□□□□□ -1.03
ATG4B-212ENST00000430617 TMEM186Q96B77 213 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 COG8Q96MW5 612 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 TTTY10Q9BZA0 68 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 NELFAQ9H3P2 528 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 ISG20L2Q9H9L3 353 aaKnown RBP8.62□□□□□ -1.03
ATG4B-212ENST00000430617 CRLF2Q9HC73 371 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 EMC7Q9NPA0 242 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 B3GAT2Q9NPZ5 323 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 BATF3Q9NR55 127 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 TMEM38BQ9NVV0 291 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 PPIAL4AQ9Y536 164 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 SLC25A15Q9Y619 301 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 LHFPL6Q9Y693 200 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 PLXNB1O43157 2135 aa8.62□□□□□ -1.03
ATG4B-212ENST00000430617 ZNF593O00488 134 aaPredicted RBP8.61□□□□□ -1.03
ATG4B-212ENST00000430617 PHYHO14832 338 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 RAD51DO75771 328 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 IGHV3-9P01782 118 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 MSR1P21757 451 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 PSMB9P28065 219 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 ZNF84P51523 738 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 FOXG1P55316 489 aaPredicted RBP8.61□□□□□ -1.03
ATG4B-212ENST00000430617 LSM6P62312 80 aaKnown RBP8.61□□□□□ -1.03
ATG4B-212ENST00000430617 BDH1Q02338 343 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 ROM1Q03395 351 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 EGR3Q06889 387 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 MLLT11Q13015 90 aaPredicted RBP8.61□□□□□ -1.03
ATG4B-212ENST00000430617 MED22Q15528 200 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 SSX1Q16384 188 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 TIGD6Q17RP2 521 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 NRN1LQ496H8 165 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 SLC18B1Q6NT16 456 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 CFAP77Q6ZQR2 320 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 GPR141Q7Z602 305 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 P2RY8Q86VZ1 359 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 ZNF433Q8N7K0 673 aaPredicted RBP8.61□□□□□ -1.03
ATG4B-212ENST00000430617 OR10S1Q8NGN2 331 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 RPS4Y2Q8TD47 263 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 YIPF6Q96EC8 236 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 C4orf36Q96KX1 117 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 OR8B4Q96RC9 309 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 MGLLQ99685 303 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 FOXB1Q99853 325 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 SUCNR1Q9BXA5 334 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 ISYNA1Q9NPH2 558 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 PNRC2Q9NPJ4 139 aaKnown RBP8.61□□□□□ -1.03
ATG4B-212ENST00000430617 ACOXLQ9NUZ1 547 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 CHCHD3Q9NX63 227 aaKnown RBP8.61□□□□□ -1.03
ATG4B-212ENST00000430617 CYB5R1Q9UHQ9 305 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 MRM2Q9UI43 246 aaKnown RBP8.61□□□□□ -1.03
ATG4B-212ENST00000430617 TMEM14AQ9Y6G1 99 aa8.61□□□□□ -1.03
ATG4B-212ENST00000430617 SMIM31A0A1B0GVY4 71 aa8.6□□□□□ -1.03
ATG4B-212ENST00000430617 ZNF587BE7ETH6 402 aa8.6□□□□□ -1.03
ATG4B-212ENST00000430617 ATP6V1G2-DDX39BF2Z307 99 aa8.6□□□□□ -1.03
ATG4B-212ENST00000430617 LYNX1G3V0Z9 82 aa8.6□□□□□ -1.03
ATG4B-212ENST00000430617 MAGEB4O15481 346 aaPredicted RBP8.6□□□□□ -1.03
ATG4B-212ENST00000430617 MT-ND5P03915 603 aa8.6□□□□□ -1.03
ATG4B-212ENST00000430617 ITGA5P08648 1049 aa8.6□□□□□ -1.03
ATG4B-212ENST00000430617 OR8G3PP0DMU2 310 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms