RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 SPARCP09486 303 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 DUX4L2P0CJ85 424 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 DUX4L3P0CJ86 424 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 DUX4L4P0CJ87 422 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 DUX4L5P0CJ88 424 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 DUX4L6P0CJ89 424 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 DUX4L7P0CJ90 424 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 SPI1P17947 270 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 EGR1P18146 543 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 CA6P23280 308 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 CD200P41217 278 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 PAX8Q06710 450 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 PCK2Q16822 640 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 ZNF181Q2M3W8 571 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 ESCO2Q56NI9 601 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 DUX4L9Q6RFH8 374 aaPredicted RBP9.82□□□□□ -0.84
HDAC4-202ENST00000430200 C16orf89Q6UX73 402 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 RASSF6Q6ZTQ3 369 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 SPATC1Q76KD6 591 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 DOK3Q7L591 496 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 DCXRQ7Z4W1 244 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 PARP8Q8N3A8 854 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 LNX2Q8N448 690 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 POP5Q969H6 163 aaKnown RBP9.82□□□□□ -0.84
HDAC4-202ENST00000430200 ADAT1Q9BUB4 502 aaKnown RBP9.82□□□□□ -0.84
HDAC4-202ENST00000430200 DUX4Q9UBX2 424 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 NUP50Q9UKX7 468 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 TMCC3Q9ULS5 477 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 CD300LBA8K4G0 201 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 TRIM77I1YAP6 450 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 SURF4O15260 269 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 IDH3BO43837 385 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 DCTN3O75935 186 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 CCNB2O95067 398 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 PTBP3O95758 552 aaKnown RBP9.81□□□□□ -0.84
HDAC4-202ENST00000430200 SRP9P49458 86 aaKnown RBP9.81□□□□□ -0.84
HDAC4-202ENST00000430200 PRKXP51817 358 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 MXRA7P84157 204 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 KLHL12Q53G59 568 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 ZNF826PQ6ZT77 177 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 PGAP1Q75T13 922 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 PRSS45Q7RTY3 260 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 MUC20Q8N307 709 aaPredicted RBP9.81□□□□□ -0.84
HDAC4-202ENST00000430200 OR52L1Q8NGH7 329 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 OR56B2PQ8NGI1 322 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 OR5L1Q8NGL2 311 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 OR2AJ1Q8NGZ0 328 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 Q8TCH9 128 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 UPRTQ96BW1 309 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 CCDC124Q96CT7 223 aaKnown RBP9.81□□□□□ -0.84
HDAC4-202ENST00000430200 SLAMF6Q96DU3 332 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 NEIL1Q96FI4 390 aaPredicted RBP9.81□□□□□ -0.84
HDAC4-202ENST00000430200 TSSK6Q9BXA6 273 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 TRIM15Q9C019 465 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 TMEM100Q9NV29 134 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 TAS2R1Q9NYW7 299 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 ZNF319Q9P2F9 582 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 OR5V1Q9UGF6 321 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 KCNG2Q9UJ96 466 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 KLHDC2Q9Y2U9 406 aa9.81□□□□□ -0.84
HDAC4-202ENST00000430200 DHRS12A0PJE2 317 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 B2RBV5 119 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.8□□□□□ -0.84
HDAC4-202ENST00000430200 SFTPBP07988 381 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 PSMB10P40306 273 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 PITPNBP48739 271 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 ENTPD1P49961 510 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 GNB2P62879 340 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 ECH1Q13011 328 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 SCGB2A2Q13296 93 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 SLC36A3Q495N2 470 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 WDR25Q64LD2 544 aaPredicted RBP9.8□□□□□ -0.84
HDAC4-202ENST00000430200 RUSC1-AS1Q66K80 236 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 SLC27A4Q6P1M0 643 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 BRD3OSQ6XYD6 125 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 MRPL21Q7Z2W9 205 aaKnown RBP9.8□□□□□ -0.84
HDAC4-202ENST00000430200 ADGRG5Q8IZF4 528 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 HS3ST5Q8IZT8 346 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 GCSAMQ8N6F7 178 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 OR2T4Q8NH00 348 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 GCDHQ92947 438 aaPredicted RBP9.8□□□□□ -0.84
HDAC4-202ENST00000430200 DGCR6LQ9BY27 220 aa9.8□□□□□ -0.84
HDAC4-202ENST00000430200 FGF23Q9GZV9 251 aaPredicted RBP9.8□□□□□ -0.84
HDAC4-202ENST00000430200 SAMHD1Q9Y3Z3 626 aaKnown RBP9.8□□□□□ -0.84
HDAC4-202ENST00000430200 PRKDCP78527 4128 aaKnown RBP9.8□□□□□ -0.84
HDAC4-202ENST00000430200 ACOT8O14734 319 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 TNFRSF13BO14836 293 aaPredicted RBP9.79□□□□□ -0.84
HDAC4-202ENST00000430200 KRT36O76013 467 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 IFNGR2P38484 337 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 SLC25A1P53007 311 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 TPTEP56180 551 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 CSNK2BP67870 215 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 OR8G1Q15617 311 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 MICAQ29983 383 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 SPATS1Q496A3 300 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 SFRP4Q6FHJ7 346 aaPredicted RBP9.79□□□□□ -0.84
HDAC4-202ENST00000430200 OR2T5Q6IEZ7 315 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 RPL13AP3Q6NVV1 102 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 DRAM2Q6UX65 266 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 DCDC5Q6ZRR9 648 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms