RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 DDOQ99489 341 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 ASIC5Q9NY37 505 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 DBX1A6NMT0 343 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 ACOT6Q3I5F7 207 aaPredicted RBP13.93□□□□□ -0.18
PTPRF-206ENST00000429895 WIPI1Q5MNZ9 446 aaPredicted RBP13.93□□□□□ -0.18
PTPRF-206ENST00000429895 STUMQ69YW2 141 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 TAAR6Q96RI8 345 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 ACTR3CQ9C0K3 210 aaPredicted RBP13.93□□□□□ -0.18
PTPRF-206ENST00000429895 ESRP2Q9H6T0 727 aaKnown RBP13.93□□□□□ -0.18
PTPRF-206ENST00000429895 LTB4R2Q9NPC1 389 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 ST3GAL6Q9Y274 331 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 FRG2CA6NGY1 282 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 UPK1AO00322 258 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 HRH1P35367 487 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 ZNF83P51522 516 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 DHRS13Q6UX07 377 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 BTLAQ7Z6A9 289 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 SPEM1Q8N4L4 309 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 GPR32P1Q8NGA4 272 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 MYEOVQ96EZ4 313 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 DCTN6O00399 190 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 PMP22Q01453 160 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 XKR7Q5GH72 579 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 LRFN3Q9BTN0 628 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 UBR2Q8IWV8 1755 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 A0A087WV62 115 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 NDUFB3O43676 98 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 RAB35Q15286 201 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 LYSMD2Q8IV50 215 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 LYSMD1Q96S90 227 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 LRRC61Q9BV99 259 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 SLCO1C1Q9NYB5 712 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 CCDC187A0A096LP49 1063 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 SOX15O60248 233 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 CDC14BO60729 498 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 OR2C1O95371 312 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 LRRC10Q5BKY1 277 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 C17orf78Q8N4C9 275 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 FBXL6Q8N531 539 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 OR2T6Q8NHC8 308 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 UBALD1Q8TB05 177 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 SLC39A7Q92504 469 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 ERGIC1Q969X5 290 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 SLC2A8Q9NY64 477 aa13.93□□□□□ -0.18
PTPRF-206ENST00000429895 TERTO14746 1132 aaKnown RBP13.92□□□□□ -0.18
PTPRF-206ENST00000429895 SRP14P37108 136 aaKnown RBP13.92□□□□□ -0.18
PTPRF-206ENST00000429895 DIO1P49895 249 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 AGERQ15109 404 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 CEACAM16Q2WEN9 425 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 DTWD2Q8NBA8 298 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 TXNIPQ9H3M7 391 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 LOXHD1Q8IVV2 1947 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 PPP1R2P9O14990 202 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 CBR3O75828 277 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 RBP4P02753 201 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 SMIM17P0DL12 118 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 KIAA0141Q14154 515 aaPredicted RBP13.92□□□□□ -0.18
PTPRF-206ENST00000429895 ZNF239Q16600 458 aaKnown RBP13.92□□□□□ -0.18
PTPRF-206ENST00000429895 ZNF766Q5HY98 468 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 TMEM179BQ7Z7N9 219 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 SCARB1Q8WTV0 552 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.92□□□□□ -0.18
PTPRF-206ENST00000429895 SIGLEC11Q96RL6 698 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 ZNF251Q9BRH9 671 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 NTN4Q9HB63 628 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 FBXO8Q9NRD0 319 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 PLSCR3Q9NRY6 295 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 CLEC5AQ9NY25 188 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 TRGV5A0A0B4J1U4 118 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 TFAP2AP05549 437 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 CEACAM5P06731 702 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 FZD2Q14332 565 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 PXDC1Q5TGL8 231 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 CMTM4Q8IZR5 234 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 MFSD4AQ8N468 514 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 CMBLQ96DG6 245 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 TRGV10A0A0A0MS01 117 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 OR2F2O95006 317 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 BSGP35613 385 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 EGR3Q06889 387 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 SMIM21Q3B7S5 101 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 Q56UQ5 140 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 SSX7Q7RTT5 188 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 ISL2Q96A47 359 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 FLVCR2Q9UPI3 526 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 PPP5D1E7EU14 171 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 SYT6Q5T7P8 510 aaPredicted RBP13.92□□□□□ -0.18
PTPRF-206ENST00000429895 ADAM5Q6NVV9 412 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 ARHGEF39Q8N4T4 335 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 CMTM3Q96MX0 182 aa13.92□□□□□ -0.18
PTPRF-206ENST00000429895 PDCD1Q15116 288 aa13.91□□□□□ -0.18
PTPRF-206ENST00000429895 C11orf42Q8N5U0 333 aa13.91□□□□□ -0.18
PTPRF-206ENST00000429895 PPIHO43447 177 aaKnown RBP13.91□□□□□ -0.18
PTPRF-206ENST00000429895 ZNF26P17031 533 aaPredicted RBP13.91□□□□□ -0.18
PTPRF-206ENST00000429895 FGF7P21781 194 aa13.91□□□□□ -0.18
PTPRF-206ENST00000429895 PNLIPRP2P54317 469 aa13.91□□□□□ -0.18
PTPRF-206ENST00000429895 RYDENQ9NUL5 291 aaKnown RBP13.91□□□□□ -0.18
PTPRF-206ENST00000429895 R4GN57 208 aa13.91□□□□□ -0.18
PTPRF-206ENST00000429895 TMEM129A0AVI4 362 aa13.91□□□□□ -0.18
PTPRF-206ENST00000429895 FAHP16930 419 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms