RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 OR6C68A6NDL8 312 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 ADAM20O43506 726 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 KNG1P01042 644 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 FABP3P05413 133 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 SFTPBP07988 381 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 IFNGR2P38484 337 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 GATA4P43694 442 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 RSPO1Q2MKA7 263 aaPredicted RBP12.08□□□□□ -0.48
SDC1-204ENST00000429035 SNAI3Q3KNW1 292 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 FIP1L1Q6UN15 594 aaKnown RBP12.08□□□□□ -0.48
SDC1-204ENST00000429035 ZNF620Q6ZNG0 422 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 C17orf107Q6ZR85 190 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 COLCA1Q6ZS62 124 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 CYB561A3Q8NBI2 242 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 PYURFQ96I23 114 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 NSMCE2Q96MF7 247 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 ELAC2Q9BQ52 826 aaKnown RBP12.08□□□□□ -0.48
SDC1-204ENST00000429035 FUZQ9BT04 418 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 COPS4Q9BT78 406 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 EGLN3Q9H6Z9 239 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 PNRC2Q9NPJ4 139 aaKnown RBP12.08□□□□□ -0.48
SDC1-204ENST00000429035 ZNF446Q9NWS9 450 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 MRPL22Q9NWU5 206 aaKnown RBP12.08□□□□□ -0.48
SDC1-204ENST00000429035 ERVK-18Q9QC07 812 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 RNF7Q9UBF6 113 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 CTSZQ9UBR2 303 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 CYB5R1Q9UHQ9 305 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 MAGEL2Q9UJ55 1249 aa12.08□□□□□ -0.48
SDC1-204ENST00000429035 TRRAPQ9Y4A5 3859 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 FAM181BA6NEQ2 426 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 POM121CA8CG34 1229 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 CD300LBA8K4G0 201 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 SRRM5B3KS81 715 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 ARPC3O15145 178 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 GRPP07492 148 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 SPARCP09486 303 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 MSX2P35548 267 aaPredicted RBP12.07□□□□□ -0.48
SDC1-204ENST00000429035 CFHR2P36980 270 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 PRKXP51817 358 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 RAG2P55895 527 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 DEFA6Q01524 100 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 ZNF92Q03936 586 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 TAF13Q15543 124 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 KCNJ8Q15842 424 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 KRTAP27-1Q3LI81 207 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 GLYATL3Q5SZD4 288 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 LYPD4Q6UWN0 246 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 ZBTB46Q86UZ6 589 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 KIR3DL3Q8N743 410 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 CELF2-AS1Q8N7Q2 184 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 OR51L1Q8NGJ5 315 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 Q8TCH9 128 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 GNPDA2Q8TDQ7 276 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 ERGIC1Q969X5 290 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 DACT3Q96B18 629 aaPredicted RBP12.07□□□□□ -0.48
SDC1-204ENST00000429035 MAP6Q96JE9 813 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 C1orf123Q9NWV4 160 aa12.07□□□□□ -0.48
SDC1-204ENST00000429035 LGALS8O00214 317 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 TBX1O43435 398 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 TOX4O94842 621 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 GYPAP02724 150 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 SLC2A1P11166 492 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 NPY4RP50391 375 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 SRSF4Q08170 494 aaKnown RBP12.06□□□□□ -0.48
SDC1-204ENST00000429035 METTL11BQ5VVY1 283 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 BRICD5Q6PL45 260 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 ZNF841Q6ZN19 808 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 DCXRQ7Z4W1 244 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 SCCPDHQ8NBX0 429 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 OR9Q2Q8NGE9 314 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 OR56B2PQ8NGI1 322 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 OR4C15Q8NGM1 316 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 OR9Q1Q8NGQ5 310 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 OR4F5Q8NH21 305 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 SLC22A4Q9H015 551 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 SMURF1Q9HCE7 757 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 CENPMQ9NSP4 180 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 TBC1D23Q9NUY8 699 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 KCNG2Q9UJ96 466 aa12.06□□□□□ -0.48
SDC1-204ENST00000429035 IGHV3OR15-7A0A075B7D8 119 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 TRAV38-1A0A0B4J264 116 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.05□□□□□ -0.48
SDC1-204ENST00000429035 A0A1B0GWJ7 208 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 C5orf63A6NC05 138 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 OOEPA6NGQ2 149 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 P2RY10O00398 339 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 ARPC2O15144 300 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 FSTL3O95633 263 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 SEMG1P04279 462 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 PSKH1P11801 424 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 ANOS1P23352 680 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 PRDX6P30041 224 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 PSMB10P40306 273 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 GSSP48637 474 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 POU4F2Q12837 409 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 TSPAN31Q12999 210 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 MIDNQ504T8 468 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 CD276Q5ZPR3 534 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 PGBD2Q6P3X8 592 aa12.05□□□□□ -0.48
SDC1-204ENST00000429035 ZNF826PQ6ZT77 177 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms