RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 OR8B3Q8NGG8 313 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 OR2AJ1Q8NGZ0 328 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 ZNF799Q96GE5 643 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 OR8B2Q96RD0 313 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 NUDT16L1Q9BRJ7 211 aaKnown RBP12.92□□□□□ -0.34
SEC13-210ENST00000428626 LYVE1Q9Y5Y7 322 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 CDH10Q9Y6N8 788 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 CMYA5Q8N3K9 4069 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 LRRC30A6NM36 301 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 CD300LBA8K4G0 201 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 CLDN34H7C241 214 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 TNFRSF13BO14836 293 aaPredicted RBP12.91□□□□□ -0.34
SEC13-210ENST00000428626 KCNAB3O43448 404 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 PTBP3O95758 552 aaKnown RBP12.91□□□□□ -0.34
SEC13-210ENST00000428626 ATP6V1B2P21281 511 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 CPT2P23786 658 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 HMGA2P52926 109 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 TPTEP56180 551 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 FGF12P61328 243 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 SAMD4BQ5PRF9 694 aaKnown RBP12.91□□□□□ -0.34
SEC13-210ENST00000428626 PRR31Q5SQ13 230 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 GLYATL3Q5SZD4 288 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 BTNL3Q6UXE8 466 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 DCDC5Q6ZRR9 648 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 C1orf87Q8N0U7 546 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 CELF2-AS1Q8N7Q2 184 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 OR4C15Q8NGM1 316 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 OR9Q1Q8NGQ5 310 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 MCUR1Q96AQ8 359 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 UNKLQ9H9P5 680 aaKnown RBP12.91□□□□□ -0.34
SEC13-210ENST00000428626 VNN3Q9NY84 501 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 IL20Q9NYY1 176 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 CLN8Q9UBY8 286 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 COMMD3-BMI1R4GMX3 469 aa12.91□□□□□ -0.34
SEC13-210ENST00000428626 GASTP01350 101 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 GYPBP06028 91 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 CLUP10909 449 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 SLC2A1P11166 492 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 GYS2P54840 703 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 MALLQ13021 153 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 OR8G1Q15617 311 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 DEFB112Q30KQ8 113 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 SFRP4Q6FHJ7 346 aaPredicted RBP12.9□□□□□ -0.34
SEC13-210ENST00000428626 CYP2R1Q6VVX0 501 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 ZNF826PQ6ZT77 177 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 MRPL21Q7Z2W9 205 aaKnown RBP12.9□□□□□ -0.34
SEC13-210ENST00000428626 DEFB107AQ8IZN7 70 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 ZNF511Q8NB15 262 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 SLC37A3Q8NCC5 494 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 OR4Q3Q8NH05 313 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 SPRYD4Q8WW59 207 aaPredicted RBP12.9□□□□□ -0.34
SEC13-210ENST00000428626 PLEKHA8Q96JA3 519 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 NSRP1Q9H0G5 558 aaKnown RBP12.9□□□□□ -0.34
SEC13-210ENST00000428626 ZMAT3Q9HA38 289 aaKnown RBP12.9□□□□□ -0.34
SEC13-210ENST00000428626 SMURF1Q9HCE7 757 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 TAGLN3Q9UI15 199 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 KCNG2Q9UJ96 466 aa12.9□□□□□ -0.34
SEC13-210ENST00000428626 TCRBV5S2A0A599 114 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 PHYHO14832 338 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 SFTPBP07988 381 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 ZNF823P16415 610 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 IFNGR2P38484 337 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 MAGEA2P43356 314 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 PRKXP51817 358 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 CRMP1Q14194 572 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 PCK2Q16822 640 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 RUSC1-AS1Q66K80 236 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 SHISA2Q6UWI4 295 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 NLRC3Q7RTR2 1065 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 DCXRQ7Z4W1 244 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 BOLLQ8N9W6 283 aaKnown RBP12.89□□□□□ -0.35
SEC13-210ENST00000428626 PROKR2Q8NFJ6 384 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 OR11L1Q8NGX0 322 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 ERGIC1Q969X5 290 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 SLC25A28Q96A46 364 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 ADAT1Q9BUB4 502 aaKnown RBP12.89□□□□□ -0.35
SEC13-210ENST00000428626 NMNAT2Q9BZQ4 307 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 RASSF4Q9H2L5 321 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 PRDM13Q9H4Q3 707 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 RNF7Q9UBF6 113 aa12.89□□□□□ -0.35
SEC13-210ENST00000428626 C3orf80F5H4A9 247 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 TNFRSF11BO00300 401 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 HOXA3O43365 443 aaPredicted RBP12.88□□□□□ -0.35
SEC13-210ENST00000428626 IRF2P14316 349 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 MMP9P14780 707 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 MDKP21741 143 aaPredicted RBP12.88□□□□□ -0.35
SEC13-210ENST00000428626 OMGP23515 440 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 MTNR1AP48039 350 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 ELF3P78545 371 aaPredicted RBP12.88□□□□□ -0.35
SEC13-210ENST00000428626 RASSF6Q6ZTQ3 369 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 WDR86Q86TI4 376 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 FGFRL1Q8N441 504 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 LNX2Q8N448 690 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 OR56B2PQ8NGI1 322 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 OR2T4Q8NH00 348 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 SPTSSAQ969W0 71 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 TBX15Q96SF7 602 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 TRIM15Q9C019 465 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 PPP1R3EQ9H7J1 279 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 ZNF696Q9H7X3 374 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms