RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 CR1LQ2VPA4 569 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 FAM120AOSQ5T036 256 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 KDM4DQ6B0I6 523 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 DRAM2Q6UX65 266 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 FAM57BQ71RH2 274 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 PGAP1Q75T13 922 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 ZDHHC13Q8IUH4 622 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 PARP8Q8N3A8 854 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 OR13G1Q8NGZ3 307 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 DNAJC9Q8WXX5 260 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 C1orf159Q96HA4 380 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 MEGF10Q96KG7 1140 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 PKP2Q99959 881 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 SLC30A2Q9BRI3 323 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 BEX2Q9BXY8 128 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 TTTY10Q9BZA0 68 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 ZNF665Q9H7R5 613 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 TMEM106BQ9NUM4 274 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 TMEM100Q9NV29 134 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 TMEFF2Q9UIK5 374 aaPredicted RBP12.56□□□□□ -0.4
RTN4-210ENST00000427710 ATRQ13535 2644 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 GGT3PA6NGU5 568 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 ZNF205O95201 554 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 SBK2P0C263 348 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 HSD11B1P28845 292 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 ESRRGP62508 458 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 GRB2P62993 217 aaKnown RBP12.55□□□□□ -0.4
RTN4-210ENST00000427710 KRTAP21-3Q3LHN1 58 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 SHFQ7M4L6 423 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 TCEANCQ8N8B7 351 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 RNF133Q8WVZ7 376 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 SPRYD4Q8WW59 207 aaPredicted RBP12.55□□□□□ -0.4
RTN4-210ENST00000427710 RAB1CQ92928 201 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 TIMD4Q96H15 378 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 CENPNQ96H22 339 aaPredicted RBP12.55□□□□□ -0.4
RTN4-210ENST00000427710 CIB1Q99828 191 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 TEX12Q9BXU0 123 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 SHARPINQ9H0F6 387 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 UBAP1Q9NZ09 502 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 IL19Q9UHD0 177 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 OAZ3Q9UMX2 235 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 PPP1R3CQ9UQK1 317 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 NPTNQ9Y639 398 aa12.55□□□□□ -0.4
RTN4-210ENST00000427710 ZAR1LA6NP61 321 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 CD300LBA8K4G0 201 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 H3BNX3 289 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 PSMD9O00233 223 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 EBAG9O00559 213 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 PRODHO43272 600 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 CYB5R3P00387 301 aaPredicted RBP12.54□□□□□ -0.4
RTN4-210ENST00000427710 IGHV2-5P01817 119 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 LYNP07948 512 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 H2BFMP0C1H6 154 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 TNFRSF1AP19438 455 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 CA6P23280 308 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 PMELP40967 661 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 OPRL1P41146 370 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 ZNF121P58317 390 aaPredicted RBP12.54□□□□□ -0.4
RTN4-210ENST00000427710 ACTR3P61158 418 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 HOXA4Q00056 320 aaPredicted RBP12.54□□□□□ -0.4
RTN4-210ENST00000427710 GFOD2Q3B7J2 385 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 SLC35D3Q5M8T2 416 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 FAM201AQ5SY85 155 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 PRAMEF6Q5VXH4 476 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 SLX4IPQ5VYV7 408 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 LRRN1Q6UXK5 716 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 MOGAT3Q86VF5 341 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 OR56B2PQ8NGI1 322 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 OTOSQ8NHW6 89 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 SIGLEC11Q96RL6 698 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 IL4I1Q96RQ9 567 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 GAL3ST1Q99999 423 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 REPIN1Q9BWE0 567 aaKnown RBP12.54□□□□□ -0.4
RTN4-210ENST00000427710 RIBC2Q9H4K1 309 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 GCM1Q9NP62 436 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 TMEM160Q9NX00 188 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 ZNF319Q9P2F9 582 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 CDC42EP3Q9UKI2 254 aa12.54□□□□□ -0.4
RTN4-210ENST00000427710 MXRA5Q9NR99 2828 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 B4DSR2 109 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 IGHV2-70P01814 119 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 SLC15A1P46059 708 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 MMP16P51512 607 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 SLC3A1Q07837 685 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 TIGD6Q17RP2 521 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 C12orf73Q69YU5 71 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 RFLNBQ8N5W9 214 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 SGK3Q96BR1 496 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 PGAM5Q96HS1 289 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 TEAD3Q99594 435 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 PPP1R3EQ9H7J1 279 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 HIF1ANQ9NWT6 349 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 COPS3Q9UNS2 423 aa12.53□□□□□ -0.4
RTN4-210ENST00000427710 PRR32B1ATL7 298 aa12.52□□□□□ -0.41
RTN4-210ENST00000427710 TMEM178BH3BS89 294 aa12.52□□□□□ -0.41
RTN4-210ENST00000427710 PLPP2O43688 288 aa12.52□□□□□ -0.41
RTN4-210ENST00000427710 MSMBP08118 114 aa12.52□□□□□ -0.41
RTN4-210ENST00000427710 SRP9P49458 86 aaKnown RBP12.52□□□□□ -0.41
RTN4-210ENST00000427710 DVL1P1P54792 670 aaPredicted RBP12.52□□□□□ -0.41
RTN4-210ENST00000427710 MAB21L1Q13394 359 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms