RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 F2RP25116 425 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 GTF2E2P29084 291 aaKnown RBP1.5□□□□□ -2.17
PTPRC-208ENST00000427110 CEACAM3P40198 252 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 SYKP43405 635 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 CSNK1EP49674 416 aaKnown RBP1.5□□□□□ -2.17
PTPRC-208ENST00000427110 RGS8P57771 180 aaPredicted RBP1.5□□□□□ -2.17
PTPRC-208ENST00000427110 LINC00315P59091 139 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 EIF3EP60228 445 aaKnown RBP1.5□□□□□ -2.17
PTPRC-208ENST00000427110 TPM4P67936 248 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 ARG2P78540 354 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 MYL5Q02045 173 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 MXD1Q05195 221 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 SF3A2Q15428 464 aaKnown RBP1.5□□□□□ -2.17
PTPRC-208ENST00000427110 RGNQ15493 299 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 PSMD5Q16401 504 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 LINC00483Q53H64 154 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 CAVIN4Q5BKX8 364 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 SPECC1LQ69YQ0 1117 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 MBOAT1Q6ZNC8 495 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 ABHD12BQ7Z5M8 362 aaPredicted RBP1.5□□□□□ -2.17
PTPRC-208ENST00000427110 BIVMQ86UB2 503 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 CNPY4Q8N129 248 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 BBS5Q8N3I7 341 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 PDCL2Q8N4E4 241 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 CCDC112Q8NEF3 446 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 OR7G2Q8NG99 324 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 OR4A4PQ8NGN8 299 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 LRRC29Q8WV35 223 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 CAPSLQ8WWF8 208 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 ESR2Q92731 530 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 DNAJC1Q96KC8 554 aaKnown RBP1.5□□□□□ -2.17
PTPRC-208ENST00000427110 WFIKKN1Q96NZ8 548 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 GSDMAQ96QA5 445 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 CCDC94Q9BW85 323 aaPredicted RBP1.5□□□□□ -2.17
PTPRC-208ENST00000427110 OR51M1Q9H341 326 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 ANKRA2Q9H9E1 313 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 SCN9AQ15858 1988 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 PARP14Q460N5 1801 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 RBBP6Q7Z6E9 1792 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 PLIN4Q96Q06 1357 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 PHLPP2Q6ZVD8 1323 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 MYO3BQ8WXR4 1341 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 ZNFX1Q9P2E3 1918 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 A0A075B6Q4 140 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 IGHV5-10-1A0A0J9YXX1 117 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 SGK1O00141 431 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 SIRPB1O00241 398 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 RAD51BO15315 384 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 NUPL2O15504 423 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 ATP8B1O43520 1251 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 STX10O60499 249 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 FKBP6O75344 327 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 FOXH1O75593 365 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 VAMP5O95183 116 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 SMC2O95347 1197 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 BCHEP06276 602 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 MRPL3P09001 348 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 OR5H8P0DN80 308 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 WARSP23381 471 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 PPP1R2P41236 205 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 CX3CR1P49238 355 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF138P52744 262 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 VSX2P58304 361 aaPredicted RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 RAB10P61026 200 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 STXBP1P61764 594 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 RPS15P62841 145 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 DYNLL1P63167 89 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 BEX3Q00994 111 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 SELENBP1Q13228 472 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 PNOCQ13519 176 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 CUL2Q13617 745 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 STK11Q15831 433 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 SNRNP35Q16560 246 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 FAM83EQ2M2I3 478 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 FAM78AQ5JUQ0 283 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 SPANXN2Q5MJ10 180 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 LY6G6FQ5SQ64 297 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 LRRC66Q68CR7 880 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 ARL9Q6T311 187 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 PLET1Q6UQ28 207 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 IGFL3Q6UXB1 125 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 EIF3MQ7L2H7 374 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 MRPL55Q7Z7F7 128 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 CMC1Q7Z7K0 106 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 TMEM150AQ86TG1 271 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 MMAAQ8IVH4 418 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 RIMKLAQ8IXN7 391 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 CMTM1Q8IZ96 169 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 GTPBP8Q8N3Z3 284 aaPredicted RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 ZFP41Q8N8Y5 198 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 PRELID2Q8N945 189 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 OR2A1Q8NGT9 310 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 OR10J6PQ8NGY7 276 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 ACMSDQ8TDX5 336 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 ABHD3Q8WU67 409 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 NTAN1Q96AB6 310 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 MCUR1Q96AQ8 359 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 EEF1AKMT3Q96AZ1 226 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 RBMXL1Q96E39 390 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 PANX1Q96RD7 426 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms