RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 FJX1Q86VR8 437 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 ZNF808Q8N4W9 903 aaPredicted RBP12.43□□□□□ -0.42
RPL28-202ENST00000426763 BOLA2-SMG1P6H3BVE0 249 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 FGF5P12034 268 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 MAGEA5P43359 124 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 SMIM21Q3B7S5 101 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 FAM185AQ8N0U4 392 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 SLC38A9Q8NBW4 561 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 S100PBPQ96BU1 408 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 PILRAQ9UKJ1 303 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 MEIKINA0A087WXM9 373 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 IFITM5A6NNB3 132 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 CCL3P10147 92 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 ATF1P18846 271 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 NOXA1Q86UR1 476 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 CRIPAKQ8N1N5 446 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 SF3B5Q9BWJ5 86 aaKnown RBP12.43□□□□□ -0.42
RPL28-202ENST00000426763 NMNAT2Q9BZQ4 307 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 A0A1W2PR77 199 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 ZNF705EA8MWA4 302 aaPredicted RBP12.43□□□□□ -0.42
RPL28-202ENST00000426763 HSD17B6O14756 317 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 S100PP25815 95 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 C9orf40Q8IXQ3 194 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 FN3KRPQ9HA64 309 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 ZNF355PQ9NSJ1 428 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 MN1Q10571 1320 aaPredicted RBP12.43□□□□□ -0.42
RPL28-202ENST00000426763 MSTNO14793 375 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 SSX5O60225 188 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 TCRBP04435 133 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 FAHP16930 419 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 TMEM52Q8NDY8 209 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 ITPKCQ96DU7 683 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 SARGQ9BW04 601 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 BTBD17A6NE02 478 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 GFRA3O60609 400 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 NPY4RP50391 375 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 C17orf47Q8NEP4 570 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 SLC30A7Q8NEW0 376 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 ZNF721Q8TF20 911 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 SMIM3Q9BZL3 60 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 RNF167Q9H6Y7 350 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 KIF25Q9UIL4 384 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 CES1P1Q9UKY3 287 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 ELK1P19419 428 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 PTPN6P29350 595 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 BCL2A1Q16548 175 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 C6orf183Q5T699 404 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 PRSS45Q7RTY3 260 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 ATG4DQ86TL0 474 aaPredicted RBP12.42□□□□□ -0.42
RPL28-202ENST00000426763 OR6X1Q8NH79 312 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 SUN5Q8TC36 379 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 HIPK2Q9H2X6 1198 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 IGKV1-8A0A0C4DH67 115 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 GALR2O43603 387 aaPredicted RBP12.42□□□□□ -0.42
RPL28-202ENST00000426763 ATP6V1G1O75348 118 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 STEAP3Q658P3 488 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 TMEM108Q6UXF1 575 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 FAM181AQ8N9Y4 354 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 SDSLQ96GA7 329 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 SCARF2Q96GP6 870 aaPredicted RBP12.42□□□□□ -0.42
RPL28-202ENST00000426763 CT45A8P0DMV1 189 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 CT45A9P0DMV2 189 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 NKX2-5P52952 324 aaPredicted RBP12.42□□□□□ -0.42
RPL28-202ENST00000426763 RRAS2P62070 204 aaPredicted RBP12.42□□□□□ -0.42
RPL28-202ENST00000426763 C2orf76Q3KRA6 126 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 PHLDA2Q53GA4 152 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 PDLIM3Q53GG5 364 aaPredicted RBP12.42□□□□□ -0.42
RPL28-202ENST00000426763 CT45A2Q5DJT8 189 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 DEGS2Q6QHC5 323 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 LINC00299Q6ZSB3 139 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 LGI3Q8N145 548 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 CISD2Q8N5K1 135 aaKnown RBP12.42□□□□□ -0.42
RPL28-202ENST00000426763 LSMEM1Q8N8F7 131 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 MOGAT1Q96PD6 335 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 FOXJ3Q9UPW0 622 aa12.42□□□□□ -0.42
RPL28-202ENST00000426763 OTOFQ9HC10 1997 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 A0A1W2PPV4 95 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 OR6C68A6NDL8 312 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 TMEM127O75204 238 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 ZNF32P17041 273 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 OR2M7Q8NG81 312 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 PCYT1BQ9Y5K3 369 aaPredicted RBP12.41□□□□□ -0.42
RPL28-202ENST00000426763 TUBG1P23258 451 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 ZNF767PQ75MW2 155 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 OR4D6Q8NGJ1 314 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 ZC3H10Q96K80 434 aaKnown RBP12.41□□□□□ -0.42
RPL28-202ENST00000426763 ESRP2Q9H6T0 727 aaKnown RBP12.41□□□□□ -0.42
RPL28-202ENST00000426763 TMEM74BQ9NUR3 256 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 LIPT2A6NK58 231 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 SPRY3O43610 288 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 PMS2P2O95744 297 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 FUCA1P04066 466 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 TAF9Q16594 264 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 PABPC1L2AQ5JQF8 200 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 ZNF546Q86UE3 836 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 TCTEX1D2Q8WW35 142 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 TSNAXQ99598 290 aaKnown RBP12.41□□□□□ -0.42
RPL28-202ENST00000426763 K7EPK0 472 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 IGHA2P01877 340 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 ALKBH6Q3KRA9 238 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms