RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 RPP30P78346 268 aaKnown RBP14.34□□□□□ -0.11
PKP4-205ENST00000426248 RHEBQ15382 184 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 REC114Q7Z4M0 266 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 OR13C2Q8NGS9 318 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 SLC2A12Q8TD20 617 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 PHYHIPLQ96FC7 376 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 DUSP22Q9NRW4 184 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 MAN2C1Q9NTJ4 1040 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 MMACHCQ9Y4U1 282 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 TMEM272A0A1B0GTI8 110 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 EIF1AYO14602 144 aaKnown RBP14.34□□□□□ -0.11
PKP4-205ENST00000426248 CXCR1P25024 350 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 GSK3AP49840 483 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 MECP2P51608 486 aaKnown RBP14.34□□□□□ -0.11
PKP4-205ENST00000426248 CXADRP78310 365 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 MLC1Q15049 377 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 DGAT2L6Q6ZPD8 337 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 PHB2Q99623 299 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 NXF5Q9H1B4 397 aaKnown RBP14.34□□□□□ -0.11
PKP4-205ENST00000426248 EXOGQ9Y2C4 368 aaKnown RBP14.34□□□□□ -0.11
PKP4-205ENST00000426248 TRAV14DV4A0A0A6YYC5 116 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 LRP3O75074 770 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 OR2C1O95371 312 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 OPN1LWP04000 364 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 GUCA1AP43080 201 aaPredicted RBP14.34□□□□□ -0.11
PKP4-205ENST00000426248 PRICKLE4Q2TBC4 344 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 C5orf34Q96MH7 638 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 VN1R1Q9GZP7 353 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 OR5V1Q9UGF6 321 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 TNFSF18Q9UNG2 199 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 SMCO3A2RU48 225 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 ALOX12BO75342 701 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 RCBTB2O95199 551 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 ID4P47928 161 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 ACTC1P68032 377 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 ACTA1P68133 377 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 C16orf47Q6ZP98 133 aaPredicted RBP14.34□□□□□ -0.11
PKP4-205ENST00000426248 ZNF550Q7Z398 422 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 OR2L13Q8N349 312 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 SEC61A2Q9H9S3 476 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 RCC2Q9P258 522 aaKnown RBP14.34□□□□□ -0.11
PKP4-205ENST00000426248 PADI1Q9ULC6 663 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 CARHSP1Q9Y2V2 147 aaKnown RBP14.34□□□□□ -0.11
PKP4-205ENST00000426248 BRINP1O60477 761 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 SFTPBP07988 381 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 GALP22466 123 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 TMEM184BQ9Y519 407 aaPredicted RBP14.33□□□□□ -0.12
PKP4-205ENST00000426248 LNP1A1A4G5 178 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 PAX6P26367 422 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 RFLNBQ8N5W9 214 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 DTD1Q8TEA8 209 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 DIO2Q92813 273 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 SLC25A38Q96DW6 304 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 OCSTAMPQ9BR26 566 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 RAB33BQ9H082 229 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 BARX1Q9HBU1 254 aaPredicted RBP14.33□□□□□ -0.12
PKP4-205ENST00000426248 GPR55Q9Y2T6 319 aaPredicted RBP14.33□□□□□ -0.12
PKP4-205ENST00000426248 CDC42EP2O14613 210 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 CTDSPLO15194 276 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 FOLR3P41439 243 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 DHRS2Q13268 280 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 MBOAT2Q6ZWT7 520 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 ZNF485Q8NCK3 441 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 HS6ST2Q96MM7 605 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 KCNK15Q9H427 330 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 CENPMQ9NSP4 180 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 LOXL2Q9Y4K0 774 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 KPTNQ9Y664 436 aa14.33□□□□□ -0.12
PKP4-205ENST00000426248 TVP23AA6NH52 213 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 NME2P1O60361 137 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 ACSM1Q08AH1 577 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 Q6ZRG5 221 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 OR4A4PQ8NGN8 299 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 MED17Q9NVC6 651 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 ALKBH4Q9NXW9 302 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 FBXO7Q9Y3I1 522 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 MUC6Q6W4X9 2439 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 MED19A0JLT2 244 aaPredicted RBP14.32□□□□□ -0.12
PKP4-205ENST00000426248 ZNF736B4DX44 427 aaPredicted RBP14.32□□□□□ -0.12
PKP4-205ENST00000426248 UMAD1C9J7I0 102 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 MCIDASD6RGH6 385 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 SMIM10L1P0DMW3 83 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 CFHR1Q03591 330 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 OTPQ5XKR4 325 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 OVCH1Q7RTY7 1134 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 KDF1Q8NAX2 398 aaPredicted RBP14.32□□□□□ -0.12
PKP4-205ENST00000426248 SMIM10Q96HG1 83 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 FAM117AQ9C073 453 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 REV3LO60673 3130 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 ACACAQ13085 2346 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 BLACEA4D250 179 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 F10P00742 488 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 FOXK2Q01167 660 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 OR1Q1Q15612 314 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 OR13C9Q8NGT0 318 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 OR6N1Q8NGY5 312 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 GPR61Q9BZJ8 451 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 UBQLN4Q9NRR5 601 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 DNAJB11Q9UBS4 358 aa14.32□□□□□ -0.12
PKP4-205ENST00000426248 MED13LQ71F56 2210 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms