RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 FOXN4Q96NZ1 517 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 PSMG3-AS1Q96PY0 264 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 OR2M2Q96R28 347 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 AMELYQ99218 206 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 KCNJ15Q99712 375 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 C14orf119Q9NWQ9 140 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 GLTPQ9NZD2 209 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 EXTL2Q9UBQ6 330 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 UPB1Q9UBR1 384 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 LRP12Q9Y561 859 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 ACOD1A6NK06 481 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 TPPPO94811 219 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 HLA-DQB1P01920 261 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 QDPRP09417 244 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 CALCBP10092 127 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 ELK1P19419 428 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 COL8A1P27658 744 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 RANBP1P43487 201 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 CSNK1A1P48729 337 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 PITPNBP48739 271 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 LSM6P62312 80 aaKnown RBP13.66□□□□□ -0.22
SHOX2-202ENST00000425436 BAK1Q16611 211 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 FBXL19-AS1Q494R0 122 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 PHYHD1Q5SRE7 291 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 C10orf128Q5T292 105 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 C9orf135Q5VTT2 229 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 TMEM244Q5VVB8 128 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 PYHIN1Q6K0P9 492 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 STAC2Q6ZMT1 411 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 CXorf67Q86X51 503 aaPredicted RBP13.66□□□□□ -0.22
SHOX2-202ENST00000425436 GABRG1Q8N1C3 465 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 ZNF671Q8TAW3 534 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 C15orf40Q8WUR7 153 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 TMEM54Q969K7 222 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 SLCO5A1Q9H2Y9 848 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 BRD7Q9NPI1 651 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 CKLFQ9UBR5 152 aa13.66□□□□□ -0.22
SHOX2-202ENST00000425436 AK6Q9Y3D8 172 aaKnown RBP13.66□□□□□ -0.22
SHOX2-202ENST00000425436 IGKV1D-43A0A0B4J1Z2 117 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 A0A1W2PPL8 197 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 KRT33AO76009 404 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 CSF3P09919 207 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 PSKH1P11801 424 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 KIR3DL2P43630 455 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 OR7E24Q6IFN5 339 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 Q6ZT83 130 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 GDPD3Q7L5L3 318 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 LINGO2Q7L985 606 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 ZNF554Q86TJ5 538 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 TMEM123Q8N131 208 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 OR6N1Q8NGY5 312 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 TMEM106AQ96A25 262 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 SLC22A4Q9H015 551 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 MOB1AQ9H8S9 216 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 SEC61A2Q9H9S3 476 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 POLE4Q9NR33 117 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 ELOVL5Q9NYP7 299 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 FOXJ3Q9UPW0 622 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 DHDHQ9UQ10 334 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 RCE1Q9Y256 329 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 POLR1DQ9Y2S0 133 aa13.65□□□□□ -0.22
SHOX2-202ENST00000425436 KLF2Q9Y5W3 355 aaPredicted RBP13.65□□□□□ -0.22
SHOX2-202ENST00000425436 TMEM269A0A1B0GVZ9 245 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 A0A1W2PQ09 198 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 MEGF11A6BM72 1044 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 SLC43A1O75387 559 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 SRSF10O75494 262 aaKnown RBP13.64□□□□□ -0.23
SHOX2-202ENST00000425436 LYZL6O75951 148 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 UBCP0CG48 685 aaKnown RBP13.64□□□□□ -0.23
SHOX2-202ENST00000425436 ATF1P18846 271 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 ACHEP22303 614 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 IGHV1-2P23083 117 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 AZGP1P25311 298 aaKnown RBP13.64□□□□□ -0.23
SHOX2-202ENST00000425436 CFPP27918 469 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 INPP1P49441 399 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 UBE2NLQ5JXB2 153 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 MZT2BQ6NZ67 158 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 IL17RDQ8NFM7 739 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 TSEN15Q8WW01 171 aaKnown RBP13.64□□□□□ -0.23
SHOX2-202ENST00000425436 SLAMF6Q96DU3 332 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 LRRC46Q96FV0 321 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 ALKBH3Q96Q83 286 aaPredicted RBP13.64□□□□□ -0.23
SHOX2-202ENST00000425436 CENPMQ9NSP4 180 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 OR52A1Q9UKL2 312 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 HHLA2Q9UM44 414 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 ETV7Q9Y603 341 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 CRYBG3Q68DQ2 2970 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 ANXA2P2A6NMY6 339 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 ZNF878C9JN71 531 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 PNPP00491 289 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 ANXA2P07355 339 aaKnown RBP13.64□□□□□ -0.23
SHOX2-202ENST00000425436 SOX2P48431 317 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 SP5Q6BEB4 398 aaPredicted RBP13.64□□□□□ -0.23
SHOX2-202ENST00000425436 HIST2H2BCQ6DN03 193 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 LRFN4Q6PJG9 635 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 CCBE1Q6UXH8 406 aaPredicted RBP13.64□□□□□ -0.23
SHOX2-202ENST00000425436 C20orf196Q8IYI0 205 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 GPR137CQ8N3F9 429 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 ZNF433Q8N7K0 673 aaPredicted RBP13.64□□□□□ -0.23
SHOX2-202ENST00000425436 ZNF837Q96EG3 531 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms