RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 RBM39Q14498 530 aaKnown RBP12.78□□□□□ -0.36
MSH5-206ENST00000423982 MST1LQ2TV78 715 aa12.78□□□□□ -0.36
MSH5-206ENST00000423982 FDX2Q6P4F2 183 aa12.78□□□□□ -0.36
MSH5-206ENST00000423982 WDFY1Q8IWB7 410 aa12.78□□□□□ -0.36
MSH5-206ENST00000423982 SPACA5Q96QH8 159 aa12.78□□□□□ -0.36
MSH5-206ENST00000423982 CRB3Q9BUF7 120 aa12.78□□□□□ -0.36
MSH5-206ENST00000423982 CNTD2Q9H8S5 307 aa12.78□□□□□ -0.36
MSH5-206ENST00000423982 UBQLN4Q9NRR5 601 aa12.78□□□□□ -0.36
MSH5-206ENST00000423982 ATXN7L1Q9ULK2 861 aaPredicted RBP12.78□□□□□ -0.36
MSH5-206ENST00000423982 COA3Q9Y2R0 106 aaPredicted RBP12.78□□□□□ -0.36
MSH5-206ENST00000423982 AGPAT2O15120 278 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 HCRTR2O43614 444 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 IL2RAP01589 272 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 HLA-DOBP13765 273 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 PSMB6P28072 239 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 PPICP45877 212 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 CAPZBP47756 277 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 MEOX2P50222 304 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 RIDAP52758 137 aaKnown RBP12.77□□□□□ -0.36
MSH5-206ENST00000423982 DCDP81605 110 aaKnown RBP12.77□□□□□ -0.36
MSH5-206ENST00000423982 FMODQ06828 376 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 PDZK1IP1Q13113 114 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 ZNF260Q3ZCT1 412 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 EMC4Q5J8M3 183 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 SLC29A4Q7RTT9 530 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 SAP25Q8TEE9 199 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 GLYATL2Q8WU03 294 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 AQP3Q92482 292 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 PTGES2Q9H7Z7 377 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 ACKR4Q9NPB9 350 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 SOHLH2Q9NX45 425 aa12.77□□□□□ -0.36
MSH5-206ENST00000423982 DHCR7Q9UBM7 475 aaKnown RBP12.77□□□□□ -0.36
MSH5-206ENST00000423982 IGLV1-36A0A0B4J1U3 117 aa12.77□□□□□ -0.37
MSH5-206ENST00000423982 ICOSLGO75144 302 aa12.77□□□□□ -0.37
MSH5-206ENST00000423982 BGLAPP02818 100 aa12.77□□□□□ -0.37
MSH5-206ENST00000423982 CD79AP11912 226 aa12.77□□□□□ -0.37
MSH5-206ENST00000423982 FUT7Q11130 342 aa12.77□□□□□ -0.37
MSH5-206ENST00000423982 AIMP2Q13155 320 aaKnown RBP12.77□□□□□ -0.37
MSH5-206ENST00000423982 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.77□□□□□ -0.37
MSH5-206ENST00000423982 GFOD2Q3B7J2 385 aa12.77□□□□□ -0.37
MSH5-206ENST00000423982 DMRTC1Q5HYR2 192 aa12.77□□□□□ -0.37
MSH5-206ENST00000423982 BAP18Q8IXM2 172 aa12.77□□□□□ -0.37
MSH5-206ENST00000423982 SPAG16Q8N0X2 631 aa12.77□□□□□ -0.37
MSH5-206ENST00000423982 NUBPLQ8TB37 319 aa12.77□□□□□ -0.37
MSH5-206ENST00000423982 ZNF587Q96SQ5 575 aaPredicted RBP12.77□□□□□ -0.37
MSH5-206ENST00000423982 PRRT1Q99946 306 aa12.77□□□□□ -0.37
MSH5-206ENST00000423982 OR11A1Q9GZK7 315 aa12.77□□□□□ -0.37
MSH5-206ENST00000423982 UQCC1Q9NVA1 299 aa12.77□□□□□ -0.37
MSH5-206ENST00000423982 FAM157CP0CG43 387 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 IL11P20809 199 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 ID4P47928 161 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 SLC9A3R2Q15599 337 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 OR52N4Q8NGI2 321 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 ARL11Q969Q4 196 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 FBXO17Q96EF6 278 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 MMABQ96EY8 250 aaPredicted RBP12.76□□□□□ -0.37
MSH5-206ENST00000423982 CNTNAP3BQ96NU0 1288 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 GAL3ST4Q96RP7 486 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 NICN1Q9BSH3 213 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 OR8D2Q9GZM6 311 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 FANCFQ9NPI8 374 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 BIN3Q9NQY0 253 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 PNO1Q9NRX1 252 aaKnown RBP12.76□□□□□ -0.37
MSH5-206ENST00000423982 OR5AC2Q9NZP5 309 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 RHBDD3Q9Y3P4 386 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 RTTNQ86VV8 2226 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 ASCC3Q8N3C0 2202 aaKnown RBP12.76□□□□□ -0.37
MSH5-206ENST00000423982 IGHV5-51A0A0C4DH38 117 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 C17orf105B2RV13 164 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 PHYHO14832 338 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 EIF3GO75821 320 aaKnown RBP eCLIP12.76□□□□□ -0.37
MSH5-206ENST00000423982 GUSBP08236 651 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 TPT1P13693 172 aaKnown RBP12.76□□□□□ -0.37
MSH5-206ENST00000423982 MUC1P15941 1255 aaPredicted RBP12.76□□□□□ -0.37
MSH5-206ENST00000423982 CXCR1P25024 350 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 MICBQ29980 383 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 SFT2D1Q8WV19 159 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 NUDT22Q9BRQ3 303 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 FAM86C1Q9NVL1 165 aa12.76□□□□□ -0.37
MSH5-206ENST00000423982 MRPS33Q9Y291 106 aaKnown RBP12.76□□□□□ -0.37
MSH5-206ENST00000423982 TNRC6BQ9UPQ9 1833 aaKnown RBP12.75□□□□□ -0.37
MSH5-206ENST00000423982 F8VVB4 439 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 F8VWA3 439 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 HLA-GP17693 338 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 C10orf91Q5T1B1 145 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 RBMS3Q6XE24 437 aaKnown RBP12.75□□□□□ -0.37
MSH5-206ENST00000423982 SLC16A13Q7RTY0 426 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 ZNF440Q8IYI8 595 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 OR51F2Q8NH61 342 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 FGGYQ96C11 551 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 SLCO5A1Q9H2Y9 848 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 HHLA2Q9UM44 414 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 CARHSP1Q9Y2V2 147 aaKnown RBP12.75□□□□□ -0.37
MSH5-206ENST00000423982 PHF3Q92576 2039 aaKnown RBP12.75□□□□□ -0.37
MSH5-206ENST00000423982 OTOGLQ3ZCN5 2332 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 SSX5O60225 188 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 IFI6P09912 130 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 GNALP38405 381 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 EIF1AXP47813 144 aaKnown RBP12.75□□□□□ -0.37
MSH5-206ENST00000423982 ROM1Q03395 351 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms